Job Description P31666 Confidence 92.02% Date Thu Jan 5 11:48:29 GMT 2012 Rank 160 Aligned Residues 101 % Identity 16% Template c3n92A_ PDB info PDB header:transferase Chain: A: PDB Molecule:alpha-amylase, gh57 family; PDBTitle: crystal structure of tk1436, a gh57 branching enzyme from2 hyperthermophilic archaeon thermococcus kodakaraensis, in complex3 with glucose Resolution 2.89 Å

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		287	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure									.	.																											.																			.																					.	.	.	.	.
Query SS confidence									.	.																											.																			.																					.	.	.	.	.
Query Sequence		S	E	L	N	E	I	R	.	.	D	V	F	D	F	Q	S	H	T	H	F	L	H	R	V	D	G	Y	R	R	P	I	L	L	S	R	.	S	E	H	N	I	L	F	D	F	A	R	S	R	R	A	L	A	Q	.	F	N	P	H	V	W	Y	L	S	Y	P	F	G	G	F	N	D	N	A	V	.	.	.	.	.
Query Conservation									.	.																											.																			.																					.	.	.	.	.
Alig confidence									.	.													.	.	.	.	.	.	.	.							.																			.																					.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.
Template Sequence		G	K	L	R	E	L	Q	D	Q	G	Y	V	E	V	I	T	S	A	A	T	H	.	.	.	.	.	.	.	.	G	Y	L	P	L	L	G	R	D	E	A	I	R	A	Q	I	A	N	G	V	A	T	Y	E	K	H	F	G	M	K	P	K	G	I	W	L	P	E	C	A	Y	R	P	A	G	E	W	E	L	P	G
Template Known Secondary structure										T	T	S					B			T	T		.	.	.	.	.	.	.	.	B		G	G	G		S																					S	S				B	B			G	G	G		B			S						T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.									.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
												358	.	360	.	.	.	.	.	.	.	.	.	370	.	.												.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	K	A	A	N	D	A	G	F	H	L	A	V	T	T	M	.	.	.	.	.	.	.	.	.	.	.	K	G	K	V	K	P	G	D	N	P	L	L	L	K	R	L	Y	I	L	R	T	D	S
Query Conservation		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	K	V	K	R	Q	G	I	E	K	F	L	E	E	F	G	L	R	Y	F	F	V	E	S	R	L	I	D	E	G	P	A	S	N	V	Y	G	E	V	L	I	A	D	T	E	K	T	T	L	R	P	Y	W	I	K	G	S	N
Template Known Secondary structure																T	T	T								S										S	S	S	S								S	S		S	S	S					S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions