Job Description P31666 Confidence 97.69% Date Thu Jan 5 11:48:29 GMT 2012 Rank 31 Aligned Residues 155 % Identity 17% Template c3m1uB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative gamma-d-glutamyl-l-diamino acid endopeptidase; PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (dvu_0896) from desulfovibrio vulgaris hildenborough at3 1.75 a resolution Resolution 1.75 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		A	R	Y	M	Q	T	I	E	N	A	A	V	W	A	Q	I	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	M	V	T	V	G	N	I	R	A	G	Q	I	I	A	V	E	P	.	.	T	A	A	S	Y	Y	A	F	N	F	G	F	G	K	G	F	I	D	K	G	H	L	E	P	V	Q
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		A	W	K	G	I	V	V	S	N	S	A	L	R	E	V	P	T	L	R	P	X	F	T	A	P	T	R	A	G	Q	G	Y	P	F	D	X	F	Q	R	T	A	V	W	X	G	T	P	V	F	V	G	H	A	T	A	D	R	A	W	L	Y	V	E	T	A	F	A	A	G	W	X	P	A	A	D	V	A	R	V	D
Template Known Secondary structure									S						S	S	S		S	S			B	S		T	T	S	T	T	S	S	T	T			T	T							T	T										T	T	S	S							S	S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	Q	K	V	E	D	G	L	G	D	L	N	K	P	L	S	N	Q	N	L	V	T	W	K	D	T	P	V	Y	N	A	P	S	A	G	S	A	P	F	G	V	L	A	D	N	L	R	Y	P	I	L	H	K	L	K	D	R	L	N	Q	T	W	Y	Q	I	R	I	G	D	R	L	A	Y	I	S	A	L	D	A
Query Conservation
Alig confidence													.	.	.	.	.	.	.													.	.	.																						.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.													.	.	.																						.	.	.	.	.														.	.	.	.	.	.	.	.
Template Sequence		D	A	F	X	T	R	Y	E	S	G	S	.	.	.	.	.	.	.	L	A	A	I	L	R	D	D	T	S	L	N	.	.	.	G	A	D	G	T	H	L	A	T	A	H	I	G	T	V	L	P	L	S	G	A	.	.	.	.	.	S	Q	V	G	R	T	V	L	V	P	V	R	A	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	S		.	.	.	.	.	.	.						S	T	T					.	.	.		T	T	S								T	T									.	.	.	.	.		S	S											.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.													.	.	.																						.	.	.	.	.														.	.	.	.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.								.	.	.	.	240	.	.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.						.	270	.	.	.	.	.	.	.	.	.	280	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	D	N	G	L	S	V	L	T	Y	H	H	I	L	R	D	E	E	N	T	R	F	R	H	T	S	T	T	T	S	V	R	A	F	N	N	Q	M
Query Conservation
Alig confidence		.	.													.
Template Conservation		.	.													.
Template Sequence		.	.	P	E	G	H	A	V	V	V	P	V	L	L	.	T	S	G	E	A	A	Q	K	P	V	P	L	T	P	G	N	X	A	E	L	G	N	R	X
Template Known Secondary structure		.	.	T	T	S	B									.		T	T	T				S	S
Template Predicted Secondary structure		.	.													.
Template SS confidence
				282	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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