Job Description P31666 Confidence 47.35% Date Thu Jan 5 11:48:29 GMT 2012 Rank 270 Aligned Residues 89 % Identity 10% Template c3l3fX_ PDB info PDB header:protein binding Chain: X: PDB Molecule:protein doa1; PDBTitle: crystal structure of a pfu-pul domain pair of saccharomyces cerevisiae2 doa1/ufd3 Resolution 1.90 Å

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		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.
Predicted Secondary structure																											.																																																		.
Query SS confidence																											.																																																		.
Query Sequence		Q	I	R	I	G	D	R	L	A	Y	I	S	A	L	D	A	Q	P	D	N	G	L	S	V	L	.	T	Y	H	H	I	L	R	D	E	E	N	T	R	F	R	H	T	S	T	T	T	S	V	R	A	F	N	N	Q	M	A	W	L	R	D	R	G	Y	A	T	L	S	M	V	Q	L	E	G	Y	.	V	K	N	K
Query Conservation																											.																																																		.
Alig confidence										.																	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation										.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	E	F	E	G	K	T	.	Y	D	Y	V	F	D	V	D	I	E	D	G	K	P	P	L	K	L	P	I	N	V	S	D	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	T	A	A	D	N	F	L	A	R	Y	E	L	P	X	S	Y	R	D	Q	V	V	Q	F	I	L	K	N	T
Template Known Secondary structure						T	T			.		S								S	T	T	S									T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T			G	G	G
Template Predicted Secondary structure										.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		377	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410																	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	L	P	A	R	A	V	V	I	T	F	D	D	G	L	K	S	V	S	R	Y	A	Y	P	V	L	K	Q	Y	G
Query Conservation
Alig confidence																	.	.	.
Template Conservation																	.	.	.
Template Sequence		X	K	V	L	P	V	K	Q	Y	L	I	X	E	N	Y	.	.	.	N	P	D	T	I	F	N	G	I	V	K	I	N
Template Known Secondary structure				S													.	.	.
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.				.	480	.	.	.	.	.	.	.	.	.	490	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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