Job Description P31666 Confidence 49.59% Date Thu Jan 5 11:48:29 GMT 2012 Rank 265 Aligned Residues 79 % Identity 20% Template c2xdpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific demethylase 4c; PDBTitle: crystal structure of the tudor domain of human jmjd2c Resolution 1.56 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		G	N	I	R	A	G	Q	I	I	A	V	E	P	T	A	A	S	Y	Y	A	F	N	F	.	.	G	F	G	K	G	F	I	D	K	G	H	L	E	P	V	Q	G	R	Q	K	V	E	D	G	L	G	D	L	N	K	P	L	S	N	Q	N	L	V	T	W	K	D	T	P	V	Y	N	A	P	S	A	G	S	A	P
Query Conservation																									.	.
Alig confidence														.	.										.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	R	Y	Y	S	C	R	V	M	A	V	T	.	.	S	Q	T	F	Y	E	V	M	F	D	D	G	S	F	S	R	D	T	F	P	E	D	I	V	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	C	L	K	L	G	P	P	A	E	G	E	V	V
Template Known Secondary structure														.	.										T	T	S								G	G	G	B		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure														.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		892	.	.	.	.	.	.	.	900	.	.	.			.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.																											930	.	.	.	.	.	.	.	.	.	940	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	V	L	A	D	N	L	R	Y	P	I	L	H	K	L	K	D	R	L	N	Q	T	W	Y	Q	I	R	I	G	D
Query Conservation
Alig confidence													.	.
Template Conservation													.	.
Template Sequence		Q	V	K	W	P	D	G	K	L	Y	G	.	.	A	K	Y	F	G	S	N	I	A	H	M	Y	Q	V	E	F	E	D
Template Known Secondary structure						T	T	S					.	.																	T	T
Template Predicted Secondary structure													.	.
Template SS confidence
		944	.	.	.	.	.	950	.	.	.	.			.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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