Job Description P31666 Confidence 20.49% Date Thu Jan 5 11:48:29 GMT 2012 Rank 366 Aligned Residues 61 % Identity 7% Template c2k89A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:phospholipase a-2-activating protein; PDBTitle: solution structure of a novel ubiquitin-binding domain from2 human plaa (pfuc, gly76-pro77 cis isomer) Resolution UNK

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		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		Q	I	R	I	G	D	R	L	A	Y	I	S	A	L	D	A	Q	P	D	N	G	L	S	V	L	.	T	Y	H	H	I	L	R	D	E	E	N	T	R	F	R	H	T	S	T	T	T	S	V	R	A	F	N	N	Q	M	A	W	L	R	D	R	G	Y	A	T	L	S	M	V	Q	L	E	G	Y	V	K	N	K
Query Conservation																											.
Alig confidence										.																	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	L	Y	E	G	K	E	.	F	D	Y	V	F	S	I	D	V	N	E	G	G	P	S	Y	K	L	P	Y	N	T	S	D	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	L	T	A	Y	N	F	L	Q	K	N	D	L	N	P	M	F	L	D	Q	V	A	K	F	I	I	D	N
Template Known Secondary structure						T	T			.		S								S	S	S		S								T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T			T	T
Template Predicted Secondary structure										.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.																	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions