Return to main results Retrieve Phyre Job Id

Job DescriptionP31666
Confidence95.99%DateThu Jan 5 11:48:29 GMT 2012
Rank40Aligned Residues55
% Identity20%Templatec2dmoA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:neutrophil cytosol factor 2; PDBTitle: refined solution structure of the 1st sh3 domain from human2 neutrophil cytosol factor 2 (ncf-2)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60. ........70.........80........
Predicted Secondary structure 












.












Query SS confidence 




























.


























Query Sequence  AVWAQIGDKMVTVGNIRAGQIIAVEPTAA. SYYAFNFGFGKGFIDKGHLEPVQGRQK
Query Conservation   
          

 
  
  
 
     . 



   
  


             
Alig confidence 













.













.


























Template Conservation 

 

      


.   

 
 
       
      
  
  
  

  
    
Template Sequence  VLFGFVPETKEELQ. VMPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPVSGPSS
Template Known Secondary structure 
SS



SSSS

.

TT


SSS
TT
STT


S

Template Predicted Secondary structure 







.

















Template SS confidence 
























































   12.......20..... ....30.........40.........50.........60.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions