Return to main results Retrieve Phyre Job Id

Job DescriptionP31666
Confidence89.19%DateThu Jan 5 11:48:29 GMT 2012
Rank200Aligned Residues37
% Identity19%Templatec1yn8E_
PDB info PDB header:unknown functionChain: E: PDB Molecule:nap1-binding protein 2; PDBTitle: sh3 domain of yeast nbp2
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130.........140.........150.. .......160......
Predicted Secondary structure 









..







Query SS confidence 


























. .













Query Sequence  VLADNLRYPILHKLKDRLNQTWYQIRI. . GDRLAYISALDAQP
Query Conservation   
  
  
 
           



  .. 
  

        
Alig confidence 















....






..













Template Conservation      

 
 
      .... 
           
 

 


  
Template Sequence  RLAEGDIVFISYKHGQ. . . . GWLVAENESGSKTGLVPEEFVSY
Template Known Secondary structure 
B
TT
T....T
TTSS
GGG
Template Predicted Secondary structure 






....






Template SS confidence 










































   1920.........30.... .....40.........50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions