Return to main results Retrieve Phyre Job Id

Job DescriptionP31666
Confidence91.24%DateThu Jan 5 11:48:29 GMT 2012
Rank175Aligned Residues42
% Identity7%Templatec1x6bA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho guanine exchange factor (gef) 16; PDBTitle: solution structures of the sh3 domain of human rho guanine2 exchange factor (gef) 16
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60........ .70.........80........
Predicted Secondary structure 







..











Query SS confidence 





















. .



















Query Sequence  NIRAGQIIAVEPTAASYYAFNF. . GFGKGFIDKGHLEPVQGRQK
Query Conservation   
  
  
 
      



  .. 
  


             
Alig confidence 





















..



















Template Conservation 
   

 
 
      

       
  
 

 



 
    
Template Sequence  TLQQADVVLVLQQEDGWLYGERLRDGETGWFPEDFARFISGPSS
Template Known Secondary structure 


TTTTTTT


GGG
SS

Template Predicted Secondary structure 




















Template SS confidence 











































   35....40.........50.........60.........70........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions