Job Description P31666 Confidence 99.88% Date Thu Jan 5 11:48:29 GMT 2012 Rank 4 Aligned Residues 122 % Identity 21% Template c1w17A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable polysaccharide deacetylase pdaa; PDBTitle: structure of bacillus subtilis pdaa, a family 42 carbohydrate esterase. Resolution 1.9 Å

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		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.
Predicted Secondary structure																								.																																																.
Query SS confidence																								.																																																.
Query Sequence		K	I	N	L	P	A	R	A	V	V	I	T	F	D	D	G	L	K	S	V	S	R	.	Y	A	Y	P	V	L	K	Q	Y	G	M	K	A	T	A	F	I	V	T	S	R	I	K	R	H	P	Q	K	W	N	P	K	S	L	Q	F	M	S	V	S	E	L	N	E	I	R	D	.	V	F	D	F	Q	S	H	T	H
Query Conservation																								.																																																.
Alig confidence																								.																										.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	N	T	K	E	K	T	I	Y	L	T	F	D	N	G	Y	E	N	G	Y	T	P	K	V	L	D	V	L	K	K	H	R	V	T	G	T	F	F	V	T	G	H	F	V	K	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	L	I	K	R	M	S	D	E	G	H	I	I	G	N	H	S	F
Template Known Secondary structure		B			T	T	T	T									S	S			S												T	T																.	.	.	.	.	.	.	.	.	.	.	.	.										T	T								S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.														.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.							.
Query SS confidence																																				.							.
Query Sequence		F	L	H	R	V	D	G	Y	R	R	P	I	L	L	S	R	S	E	H	N	I	L	F	D	F	A	R	S	R	R	A	L	A	Q	.	F	N	P	H	V	W	.	Y	L	S	Y	P	F	G	G	F	N	D	N	A	V	K	A	A	N	D	A	G	F	H	L	A
Query Conservation																																				.							.
Alig confidence				.	.	.	.	.	.	.	.																									.							.
Template Conservation				.	.	.	.	.	.	.	.
Template Sequence		H	H	.	.	.	.	.	.	.	.	P	D	L	T	T	K	T	A	D	Q	I	Q	D	E	L	D	S	V	N	E	E	V	Y	K	I	T	G	K	Q	D	N	L	Y	L	R	P	P	R	G	V	F	S	E	Y	V	L	K	E	T	K	R	L	G	Y	Q	T	V
Template Known Secondary structure		S		.	.	.	.	.	.	.	.			G	G	G	S																					S										G	G	G													T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.
Template SS confidence
		127	.									.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions