Job Description P31666 Confidence 98.80% Date Thu Jan 5 11:48:29 GMT 2012 Rank 25 Aligned Residues 123 % Identity 21% Template c1m9sA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:internalin b; PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains. Resolution 2.65 Å

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		34	.	.	.	.			.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure							.	.											.	.												.	.	.	.														.
Query SS confidence							.	.											.	.												.	.	.	.														.
Query Sequence		V	W	A	Q	I	.	.	G	D	K	M	V	T	V	G	N	I	.	.	R	A	G	Q	I	I	A	V	E	P	T	.	.	.	.	A	A	S	Y	Y	A	F	N	F	G	F	G	K	.	G	F	I	D	K	G	H	L	E	P	V	Q	G	R	Q	K	V	E	D	G	L	G	D	L	N	K	P	L	S	N	Q	N
Query Conservation							.	.											.	.												.	.	.	.														.
Alig confidence							.	.											.	.												.	.	.	.														.																							.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.
Template Sequence		V	W	T	K	P	Y	N	T	A	G	A	K	H	V	N	K	L	S	V	Y	Q	G	K	N	M	R	I	L	R	E	A	K	T	P	I	T	T	W	Y	Q	F	S	I	G	G	K	V	I	G	W	V	D	T	R	A	L	N	T	F	Y	K	Q	S	M	E	K	P	T	R	L	.	.	.	.	.	.	.	.	T	R
Template Known Secondary structure			B	S	S	S	S	S	S	T	T							G	G	G	G		S	S											S	S									T	T								T	T	T							G	G	G							.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.
Template SS confidence
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.									560	.
		105	.	.	.	.	110	.	.			.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure										.	.						.												.	.																											.
Query SS confidence										.	.						.												.	.																											.
Query Sequence		L	V	T	W	K	D	T	P	.	.	V	Y	N	A	P	.	S	A	G	S	A	P	F	G	V	L	A	.	.	D	N	L	R	Y	P	I	L	H	K	L	K	D	R	L	N	Q	T	W	Y	Q	I	R	I	G	D	.	R	L	A	Y	I	S	A	L	D	A	Q
Query Conservation										.	.						.												.	.																											.
Alig confidence										.	.						.												.	.														.													.
Template Conservation																																												.
Template Sequence		Y	V	S	A	N	K	A	G	E	S	Y	Y	K	V	P	V	A	D	N	P	V	K	R	G	T	L	A	K	Y	K	N	Q	K	L	I	V	D	C	Q	A	T	I	.	E	G	Q	L	W	Y	R	I	R	T	S	S	T	F	I	G	W	T	K	A	A	N	L	R
Template Known Secondary structure					T	T	T	T	T	S				S	S	S	S			G	G	G					G	G	G	S	T	T												.	T	T									S	S	S							G	G	G
Template Predicted Secondary structure																																												.
Template SS confidence
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.		.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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