Job Description P31666 Confidence 97.44% Date Thu Jan 5 11:48:29 GMT 2012 Rank 32 Aligned Residues 144 % Identity 13% Template c1k1yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:4-alpha-glucanotransferase; PDBTitle: crystal structure of thermococcus litoralis 4-alpha-glucanotransferase2 complexed with acarbose Resolution 2.40 Å

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		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																					.																																					.	.
Query SS confidence																					.																																					.	.
Query Sequence		F	D	D	G	L	K	S	V	S	R	Y	A	Y	P	V	L	K	Q	Y	.	G	M	K	A	T	A	F	I	V	T	S	R	I	K	R	H	P	Q	K	W	N	P	K	S	L	Q	F	M	S	V	S	E	L	N	E	I	.	.	R	D	V	F	D	F	Q	S	H	T	H	F	L	H	R	V	D	G	Y	R	R	P
Query Conservation																					.																																					.	.
Alig confidence																					.																								.	.	.	.	.	.								.	.														.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Sequence		F	E	E	A	Y	N	R	S	Y	R	P	F	M	E	I	L	E	E	F	P	E	M	K	V	N	V	H	F	S	G	P	L	L	E	W	I	E	E	N	K	P	D	Y	.	.	.	.	.	.	L	D	L	L	R	S	L	I	K	R	G	Q	L	E	I	V	V	A	G	F	Y	E	.	.	.	.	.	.	.	.	P
Template Known Secondary structure									T										T		T	T																							.	.	.	.	.	.										T	T						B			T	T		.	.	.	.	.	.	.	.	B
Template Predicted Secondary structure																																													.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.									.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	L	S	R	S	E	H	N	I	L	F	D	F	A	R	S	R	R	A	L	A	Q	F	N	P	H	V	W	Y	L	S	Y	P	F	G	G	F	N	D	N	A	V	K	A	A	N	D	A	G	F	H	L	A	V	T	T	M	K	G	K	V	K	P	G	D	N	P	L	L	L	K	R	L	Y	I	L	R	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	A	A	I	P	K	E	D	R	L	V	Q	I	E	M	L	K	D	Y	A	R	K	L	G	Y	D	A	K	G	V	W	L	T	E	R	V	W	Q	P	E	L	V	K	S	L	R	E	A	G	I	E	Y	V	V	V	D	D	Y	H	F	M	S	A	G	L	S	K	E	E	L	F	W	P	Y	Y	T	E	D	G
Template Known Secondary structure			G	G	G	S																			T	T									G	G	G				T	T								T	T															T			G	G	G		S	S							T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		395
Predicted Secondary structure
Query SS confidence
Query Sequence		S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		169

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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