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Job DescriptionP37794
Confidence47.73%DateThu Jan 5 11:57:42 GMT 2012
Rank23Aligned Residues167
% Identity23%Templated2j13a1
SCOP info7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase NodB-like polysaccharide deacetylase
Resolution1.7

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAIDHAVQLSRD. . EPSLAIGMHFVLTMGKPLTAMPGLTRD
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Template Sequence  KKDIYLTFDN. GYENGYTGKILDVLKEKKVPAT. FFVTGHYIKTQKDLLLRMKDEGHIIGNHSWSHPDFT. . . . . . . . . .
Template Known Secondary structure  S
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TT


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Query Sequence  GVLGKWIWQLAEEDALPLEEITQELVSQYLRFIELFGRKP. THLDSHHHVHMFPQIFPIVARFAAEQGIALRADRQMAFD
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Template Sequence  . . . . . . . . . . . . . . AVNDEKLREELTSVTEEIKKVTGQKEVKYVRPPRGVFS. . . . . ERTLALTKEMGYYNVFWSLAFLD
Template Known Secondary structure  ..............GS


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GGG
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   112.......120.........130.........140......... 150.........160.........170..
 
   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  LPVNLRTTQGFSSAFYGEEISESLFLQVLDDAGHRGDRSLEVMCHPAFIDNTIRQSAYCFPRLTELDVLTSASLKGAIAQ
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WIHPGSILLLHAISKDN. . . . . . . . . . . . . . AEAL. . AKIIDDLRE
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TTB


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   173......180......... 190... ......200..
 
   239240.........
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Query Sequence  RGYRLGSYRDV
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Template Sequence  KGYHFKSLDDL
Template Known Secondary structure  TT

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   221........230.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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