Job Description P37794 Confidence 73.30% Date Thu Jan 5 11:57:42 GMT 2012 Rank 19 Aligned Residues 190 % Identity 16% Template d2iw0a1 SCOP info 7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase NodB-like polysaccharide deacetylase Resolution 1.81

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.								.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.
Query Sequence		E	R	L	L	I	V	N	A	D	D	F	G	L	S	K	G	Q	N	Y	G	I	I	E	A	C	R	N	G	I	V	T	S	T	T	A	L	V	.	.	.	.	.	.	.	N	G	Q	A	I	D	H	A	V	Q	L	S	R	D	E	P	S	L	A	I	G	M	H	F	V	L	T	M	G	K	P	L	T	A	M	P
Query Conservation																																							.	.	.	.	.	.	.
Alig confidence												.					.																						.	.	.	.	.	.	.																.													.	.	.	.	.	.	.	.
Template Conservation												.					.																																												.													.	.	.	.	.	.	.	.
Template Sequence		P	G	L	V	A	L	T	Y	D	D	.	G	P	F	T	.	F	T	P	Q	L	L	D	I	L	K	Q	N	D	V	R	A	T	F	F	V	N	G	N	N	W	A	N	I	E	A	G	S	N	P	D	T	I	R	R	M	R	A	D	.	G	H	L	V	G	S	H	T	Y	A	H	P	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S								S	.		S		T	.	T												T									S	B	S	S	S	B	T	T	S	T	T											T	.	T								S	S			.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.					.																																												.													.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50		.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	T	R	D	G	V	L	G	K	W	I	W	Q	L	A	E	E	D	A	L	P	L	E	E	I	T	Q	E	L	V	S	Q	Y	L	R	F	I	E	L	F	G	R	K	P	T	H	L	D	S	H	H	H	V	H	M	F	P	Q	I	F	P	I	V	A	R	F	A	A	E	Q	G	I	A	L	R	A	D	R	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.																								.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.																								.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	N	T	L	S	S	A	D	R	I	S	Q	M	R	Q	L	E	E	A	T	R	R	I	D	G	F	A	P	K	Y	M	R	.	.	.	.	.	A	P	Y	L	S	C	D	A	G	C	Q	G	D	L	G	G	L	G	Y	H	I	I	D	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S																					S				S				.	.	.	.	.		G	G	G													T	T						.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.																								.	.	.
Template SS confidence
																		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.						.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	F	D	L	P	V	N	L	R	T	T	Q	G	F	S	S	A	F	Y	G	E	E	I	S	E	S	L	F	L	Q	V	L	D	D	A	G	H	R	G	D	R	S	L	E	V	M	C	H	P	A	F	I	D	N	T	I	R	Q	S	A	Y	C	F	P	R	L	T	E	L	D	V	L	T	S	A	S	L	K	G
Query Conservation
Alig confidence		.	.	.	.	.	.																																									.	.					.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation		.	.	.	.	.	.																																									.	.					.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		.	.	.	.	.	.	T	N	L	D	T	K	D	Y	E	N	N	K	P	E	T	T	H	L	S	A	E	K	F	N	N	E	L	S	A	D	V	G	A	N	S	Y	I	V	L	S	.	.	H	D	V	H	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	T	V	V	S	L	T	.	.	Q	K	L	I	D
Template Known Secondary structure		.	.	.	.	.	.		S					T	T	T	S		S	T	T	T												S		S		G	G	G								.	.		T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.						T			.	.
Template Predicted Secondary structure		.	.	.	.	.	.																																									.	.					.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
								166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.														210	.	.	.	.	.	.	.			.	.	220	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	Q	R	G	Y	R	L	G	S	Y	R	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	K	S	K	G	Y	R	A	V	T	V	G	E	C
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions