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30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
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. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
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|  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
Query SS confidence |   |
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| . |
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Query Sequence |   |
I | V | T | S | T | T | A | L | V | N | G | Q | A | . |
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I | D | H | A | V | Q | L | S | R | D | E | P | S | L | A | I | G | M | H | F | V | L | T | M | G | K | P | L | T | A | M | P | G | L | T | R | D | G | V | L | G | K | W | I | W | Q | L | A | E | E | D | A | L | P | L | E | E | I | T | Q | E | L |
Query Conservation |   |
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|   | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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Alig confidence |   |
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| . | . | . | . | . |
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Template Conservation |   |
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|   |   |   | . |
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| . | . | . | . | . | . | . | . | . | . | . | . |
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Template Sequence |   |
L | V | S | S | A | N | L | A | C | G | F | H | G | G | S | P | G | R | I | L | E | A | V | R | L | A | K | A | H | . |
G | V | A | V | G | A | H | . |
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P | G | F | P | D | L | V | G | F | G | R | R | E | M | A | . |
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L | S | P | E | E | V | Y | A | D | V |
Template Known Secondary structure |   |
T |
| S |  |  |  |  |  |
| S | S | S | S |
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|  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T |
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |
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| S |
| T | T | T | T | T |
| S |
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| . | . | . | . | . | . |
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|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
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| . | . | . | . | . | . |
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Template SS confidence |   |
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  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
. | . | . | . | 60 | . | . | |
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. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
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. | . | 80 | . | . | . | . | . | . | . |
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  |   |
105 | . | . | . | |
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. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
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. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  | . | . | . |  |  |  |  |  |  |  |
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|  |  |
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| . | . | . | . |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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| . |
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| . |
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Query Sequence |   |
V | S | Q | Y | . |
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. |
L | R | F | I | E | L | F | G | R | K | P | T | H | L | D | S | H | H | . |
. |
. |
. |
H | V | H | M | F | P | Q | I | F | P | I | V | A | R | F | A | A | E | Q | G | I | A | L |
Query Conservation |   |
  |
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|
| . | . | . |   |   |
|   |   |   |   |
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|   |
|   | . | . | . | . |
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|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
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|   |   |
Alig confidence |   |
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| . | . | . |
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| . | . | . | . |
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Template Conservation |   |
  |
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|   |   |   |   |   |   |   |
|   |   |
|   |
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|   |   |   |   |
|   |   |   |
|   |
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|   |   |
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|   |   |   |
|   |   |
|
Template Sequence |   |
L | Y | Q | I | G | A | L | S | A | F | L | K | A | E | G | L | P | L | H | H | V | K | P | H | G | A | L | Y | L | K | A | C | R | D | R | E | T | A | R | A | I | A | L | A | V | K | A | F | D | P | G | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
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| B |
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|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
  |