Return to main results Retrieve Phyre Job Id

Job DescriptionP37794
Confidence94.64%DateThu Jan 5 11:57:42 GMT 2012
Rank14Aligned Residues181
% Identity14%Templated2c71a1
SCOP info7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase NodB-like polysaccharide deacetylase
Resolution1.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30........ .40.........50.........60.........70.........
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Query Sequence  RLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALV. . . NGQAIDHAVQLSRDEPSLAIGMHFVLTMGKPLTAMPGLTRD
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Template Sequence  KLVALTFDD. GPDNVLTARVLDKLDKYNVKATFMVVGQRVNDSTAAIIRRMVNS. GHEIGNHSWSY. . . . . . . . . . . . . .
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GGG
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   480........ .490.........500.........510.........520.........530.. .......540...
 
   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  GVLGKWIWQLAEEDALPLEEITQELVSQYLRFIELFGRKPTHLDSHHHVHMFPQIFPIVARFAAEQGIALRADRQMAFDL
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Template Sequence  . . . . . . . . . . SGMANMSPDQIRKSIADTNAVIQKYAGTTPKFF. . . . . . . . . . . . . . . . . . . . . . . . . . . RPPNLETSPT
Template Known Secondary structure  ..........S

TT

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   544.....550.........560.........570...... ...580......
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  PVNLRTTQGFSSAFYGEEISESLFLQVLDDAGHRGDRSLEVMCHPAFIDNTIRQSAYCFPRLTELDVLTSASLKGAIAQR
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Template Sequence  LFNNVDLVFVGGLTANDWIPSTTAEQRAAAVINGVRDGTIILLHDVQPEPH. . . . . . . . . . . PTPEAL. . DIIIPTLKSR
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SB

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   587..590.........600.........610.........620.........630....... ..640... ......650...
 
   240.........
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Query Sequence  GYRLGSYRDV
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Template Sequence  GYEFVTLTEL
Template Known Secondary structure  T


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   654.....660...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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