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Job DescriptionP37794
Confidence96.60%DateThu Jan 5 11:57:42 GMT 2012
Rank9Aligned Residues185
% Identity21%Templated1ny1a_
SCOP info7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase NodB-like polysaccharide deacetylase
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.. .......60.........70.........
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Query Sequence  ERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAIDHAVQLSRD. . EPSLAIGMHFVLTMGKPLTAMPGLTRD
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Template Sequence  EKTIYLTFDN. GYENGYTPKVLDVLKKHRVTG. TFFVTGHFVKDQPQLIKRXSDEGHIIGNHS. . . . . . . . FHHPDL. . .
Template Known Secondary structure  SS.SS

S
TT


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G...
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   65....70.... .....80.........90..... ....100.........110.........120..... ....130.
 
   80.........90.........100.........110.........120 .........130.........140.........150........
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Query Sequence  GVLGKWIWQLAEEDALPLEEITQELVSQYLRFIELFGRKPT. HLDSHHHVHMFPQIFPIVARFAAEQGIALRADRQMAFD
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Template Sequence  . . . . . . . . . . . . . TTKTADQIQDELDSVNEEVYKITGKQDNLYLR. . . . . PPRGVFSEYVLKETKRLGYQTVFWSVAFVD
Template Known Secondary structure  .............GGS
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GGG
TT
B

SB

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   132.......140.........150.........160... ......170.........180.........190...
 
   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  LPVNLRTTQGFSSAFYGEEISESLFLQVLDDAGHRGDRSLEVMCHPAFIDNTIRQSAYCFPRLTELDVLTSASLKGAIAQ
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Template Sequence  WKINNQKGK. . . . . . . . . . . . . . . . KYAYDHXIKQAHPGAIYLLHTVSRDNA. . . . . . . . . . . . . . EAL. . DDAITDLKK
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GGG


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   194.....200.. .......210.........220......... 230.. .......240.
 
   239240.........
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Query Sequence  RGYRLGSYRDV
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Template Sequence  QGYTFKSIDDL
Template Known Secondary structure  T

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   242.......250..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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