Job Description P37794 Confidence 17.46% Date Thu Jan 5 11:57:42 GMT 2012 Rank 37 Aligned Residues 194 % Identity 12% Template c3rxzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:polysaccharide deacetylase; PDBTitle: crystal structure of putative polysaccharide deacetylase from2 mycobacterium smegmatis Resolution 2.01 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		D	F	G	L	S	K	G	Q	N	Y	G	I	I	E	A	C	R	N	G	I	V	T	S	T	T	A	L	V	N	G	Q	A	.	.	I	D	H	A	V	Q	L	S	R	D	E	P	S	L	A	I	G	M	H	F	V	L	T	M	G	K	P	L	T	A	M	P	G	L	T	R	D	G	V	L	G	K	W	I	W	Q
Query Conservation																																		.	.
Alig confidence												.																						.	.												.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																																			.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Y	G	P	L	V	G	V	P	R	.	L	L	G	I	L	D	E	F	N	V	P	G	T	F	F	V	P	G	Y	T	A	H	R	H	P	E	P	I	R	S	I	A	R	A	.	G	H	E	I	A	H	H	G	Y	L	H	E	S	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T					.								T	T															S										T	.	T								S	S					T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.																																			.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	E	D	A	L	P	L	E	E	I	T	Q	E	L	V	S	Q	Y	L	R	F	I	E	L	F	G	R	K	P	T	H	L	D	S	H	H	H	V	H	M	F	P	Q	I	F	P	I	V	A	R	F	A	A	E	Q	G	I	A	L	R	A	D	R	Q	M	A	F	D	L	P	V	N	L	R	T	T	Q	G
Query Conservation
Alig confidence		.	.	.	.	.																																						.	.	.	.	.
Template Conservation		.	.	.	.	.																																						.	.	.	.	.
Template Sequence		.	.	.	.	.	G	A	D	E	D	T	E	R	K	I	L	T	R	G	I	E	A	L	E	E	V	A	G	V	H	P	V	G	Y	R	A	P	X	W	E	X	N	.	.	.	.	.	W	H	T	P	K	L	L	A	E	F	G	F	L	Y	D	S	T	L	X	D	S	D	H	P	Y	E	L	A	V	G	D	G	S
Template Known Secondary structure		.	.	.	.	.	T																						S									G	G	G				.	.	.	.	.	T	T								T	T		S							S		S	S				B			T	T	S
Template Predicted Secondary structure		.	.	.	.	.																																						.	.	.	.	.
Template SS confidence
							113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		169	170	.	.	.	.	.	.	.	.	.																								180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	S	A	F	Y	G	E	E	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	L	F	L	Q	V	L	D	D	A	G	H	R	G	D	R	S	L	E	V	M	C	H	P	A	F	I	D	N	T	I	R	Q	S	A	Y	C	F	P	R	L	T	E	L	D
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																.	.	.	.	.	.	.	.
Template Conservation																																																			.																.	.	.	.	.	.	.	.
Template Sequence		L	V	E	L	P	V	S	W	A	L	D	D	W	Q	Q	Y	C	F	V	P	D	F	S	G	T	G	L	I	E	T	P	A	K	A	I	E	L	W	R	A	E	L	N	A	X	R	D	I	G	.	G	A	W	V	L	T	N	H	P	F	L	S	G	R	P	.	.	.	.	.	.	.	.	G	R	A	A	A	L	R
Template Known Secondary structure									G	G	G	B	S							B	T	T	T	B		S	S																							T	.													T	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.																.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.									.	.	.	250	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		V	L	T	S	A	S	L	K	G	A	I	A	Q	.	R	G	Y	R	L	G	S	Y	R	D	V
Query Conservation															.
Alig confidence		.	.	.	.	.									.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	E	F	I	A	E	V	C	A	X	D	D	V	W	V	A	G	X	S	Q	I
Template Known Secondary structure		.	.	.	.	.								T		T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions