Job Description P37794 Confidence 96.71% Date Thu Jan 5 11:57:42 GMT 2012 Rank 6 Aligned Residues 178 % Identity 17% Template c2c1iA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidoglycan glcnac deacetylase; PDBTitle: structure of streptococcus pnemoniae peptidoglycan2 deacetylase (sppgda) d 275 n mutant. Resolution 1.35 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		E	R	L	L	I	V	N	A	D	D	F	G	L	S	K	G	Q	N	Y	G	I	I	E	A	C	R	N	G	I	V	T	S	T	T	A	L	V	N	G	Q	A	.	.	.	I	D	H	A	V	Q	L	S	R	D	E	P	S	L	A	I	G	M	H	F	V	L	T	M	G	K	P	L	T	A	M	P	G	L	T	R
Query Conservation																																											.	.	.
Alig confidence												.																							.								.	.	.												.								.	.	.									.	.	.	.	.	.
Template Conservation												.																							.																						.								.	.	.									.	.	.	.	.	.
Template Sequence		Q	K	V	V	A	L	T	F	N	D	.	G	P	N	P	A	T	T	P	Q	V	L	E	T	L	A	K	Y	D	I	K	A	T	.	F	F	V	L	G	K	N	V	S	G	N	E	D	L	V	K	R	I	K	S	E	.	G	H	V	V	G	N	H	.	.	.	S	W	S	H	P	I	L	S	.	.	.	.	.	.
Template Known Secondary structure											S	.				T	T	T											T	T					.					G	G	G	T	T	T											T	.	T							.	.	.		S	S				G	G	.	.	.	.	.	.
Template Predicted Secondary structure												.																							.																						.								.	.	.									.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.				.	.	.	330	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	V	L	G	K	W	I	W	Q	L	A	E	E	D	A	L	P	L	E	E	I	T	Q	E	L	V	S	Q	Y	L	R	F	I	E	L	F	G	R	K	P	T	H	L	D	S	H	H	H	V	H	M	F	P	Q	I	F	P	I	V	A	R	F	A	A	E	Q	G	I	A	L	R	A	D	R	Q	M	A	F	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	S	L	D	E	A	K	K	Q	I	T	D	T	E	D	V	L	T	K	V	L	G	S	S	S	K	L	.	.	.	.	.	.	.	.	M	R	P	P	Y	G	A	I	T	D	D	I	R	N	S	L	D	L	S	F	I	M	W	D	V	D	S	L	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S																					S						.	.	.	.	.	.	.	.				G	G	G									T	S	S							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template SS confidence
																	335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.									.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	V	N	L	R	T	T	Q	G	F	S	S	A	F	Y	G	E	E	I	S	E	S	L	F	L	Q	V	L	D	D	A	G	H	R	G	D	R	S	L	E	V	M	C	H	P	A	F	I	D	N	T	I	R	Q	S	A	Y	C	F	P	R	L	T	E	L	D	V	L	T	S	A	S	L	K	G	A	I	A	Q
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		W	K	S	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	S	I	L	T	E	I	Q	H	Q	V	A	N	G	S	I	V	L	M	H	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	P	T	V	N	A	L	.	.	P	R	V	I	E	Y	L	K	N
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
		392	.	.	.	.																				.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.															420	.	.	.	.	.	.	.			.	.	430	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Y	R	L	G	S	Y	R	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	G	Y	T	F	V	T	I	P	E	M
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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