Job Description P37025 Confidence 100.00% Date Thu Jan 5 11:54:33 GMT 2012 Rank 2 Aligned Residues 170 % Identity 25% Template c1vdxA_ PDB info PDB header:ligase Chain: A: PDB Molecule:hypothetical protein ph0099; PDBTitle: crystal structure of a pyrococcus horikoshii protein with2 similarities to 2'5' rna-ligase Resolution 2.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																.																																		.	.
Query SS confidence																																.																																		.	.
Query Sequence		Q	R	L	F	F	A	I	D	L	P	A	E	I	R	E	Q	I	I	H	W	R	A	T	H	F	P	P	E	A	G	.	R	P	V	A	A	D	N	L	H	L	T	L	A	F	L	G	E	V	S	A	E	K	E	K	A	L	S	L	L	A	G	R	I	.	.	R	Q	P	G	F	T	L	T	L	D	D	A	G	Q
Query Conservation																																.																																		.	.
Alig confidence																																.																																		.	.
Template Conservation
Template Sequence		M	R	A	F	I	A	I	D	V	N	E	S	V	R	D	S	L	V	R	A	Q	D	Y	I	G	S	K	E	A	K	I	K	F	V	E	R	E	N	L	H	I	T	L	K	F	L	G	E	I	T	E	E	Q	A	E	E	I	K	N	I	L	K	K	I	A	E	K	Y	K	K	H	E	V	K	V	K	G	I	G	V
Template Known Secondary structure																											S	S	S								G	G	G																												T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.									140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure							.	.	.																																																						.	.	.	.	.	.	.	.
Query SS confidence							.	.	.																																																						.	.	.	.	.	.	.	.
Query Sequence		W	L	R	S	R	.	.	.	V	V	W	L	G	M	R	Q	P	P	R	G	L	I	Q	L	A	N	M	L	R	S	Q	A	A	R	S	G	C	F	Q	S	N	R	P	F	H	P	H	I	T	L	L	R	D	A	S	E	A	V	T	I	P	.	.	.	.	.	.	.	.	P	P	G	F	N	W	S	Y	A	V	T
Query Conservation							.	.	.																																																						.	.	.	.	.	.	.	.
Alig confidence							.	.	.							.																												.																			.	.	.	.	.	.	.	.
Template Conservation																.																												.
Template Sequence		F	P	N	P	N	Y	I	R	V	I	W	A	G	I	.	E	N	D	E	I	I	R	E	M	A	R	E	I	E	D	E	L	A	K	L	G	F	K	K	E	G	N	.	F	V	A	H	I	T	L	G	R	V	K	F	V	K	D	K	L	G	L	T	M	K	L	K	E	L	A	N	E	D	F	G	S	F	V	V	D
Template Known Secondary structure					S	S	S									.																			T	T	T					S	S	.														S											T	T	T	T
Template Predicted Secondary structure																.																												.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	T	L	Y	A	S	S	F	A	R	G	R	T	R	Y	T	P	L	K	R	W	A	L	T	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	E	L	K	K	S	T	L	T	P	K	G	P	I	Y	E	T	L	A	R	F	E	L	S	E
Template Known Secondary structure												T	T													B
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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