Job Description P00926 Confidence 100.00% Date Thu Jan 5 10:57:11 GMT 2012 Rank 26 Aligned Residues 350 % Identity 16% Template d1v8za1 SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.21

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	P	Y	V	G	L	T	E	Q	D	V	Q	D	A	H	A	R	L	S	R	F	A	P	Y	L	A	K	A	F	P	E	T	A	A	T	G	G	I	I	E	S	E	L	V	A	I	P	A	M	Q	K	R	L	E	K	E	Y	Q	Q	P	I	S	G	Q	L	L	L	K	K	D	S	H	L	P	I	S	G	S	I
Query Conservation
Alig confidence																																								.																		.	.	.	.	.	.	.													.
Template Conservation																																								.																		.	.	.	.	.	.	.													.
Template Sequence		V	P	E	T	L	I	E	P	L	K	E	L	E	K	A	Y	K	R	F	K	D	D	E	E	F	N	R	Q	L	N	Y	Y	L	K	T	W	A	G	.	R	P	T	P	L	Y	Y	A	K	R	L	T	E	K	I	G	G	.	.	.	.	.	.	.	A	K	I	Y	L	K	R	E	D	L	V	H	.	G	G	A	H
Template Known Secondary structure																						T															T	T		.		S														T	S	.	.	.	.	.	.	.	S							G	G	G	S	T	.	T	S	B	T
Template Predicted Secondary structure																																								.																		.	.	.	.	.	.	.													.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.								.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		K	A	R	G	G	I	Y	E	V	L	A	H	A	E	K	L	A	L	E	A	G	L	L	T	L	D	D	D	Y	S	K	L	L	S	P	E	F	K	Q	F	F	S	Q	Y	S	I	A	V	G	S	T	G	N	L	G	L	S	I	G	I	M	S	A	R	I	G	F	K	V	T	V	H	M	S	A	.	.	.	D	A
Query Conservation																																																																													.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	N	N	A	I	G	Q	A	L	L	A	K	F	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	R	L	I	A	E	T	G	A	G	Q	H	G	V	A	T	A	M	A	G	A	L	L	G	M	K	V	D	I	Y	M	G	A	E	D	V	E	R
Template Known Secondary structure																T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S	S													T	T													T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																										.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																				.	.	.																			.							.	.	.	.	.	.
Query SS confidence																				.	.	.																			.							.	.	.	.	.	.
Query Sequence		R	A	W	K	K	A	K	L	R	S	H	G	V	T	V	V	E	Y	.	.	.	E	Q	D	Y	G	V	A	V	E	E	G	R	K	A	A	Q	S	D	.	P	N	C	F	F	I	.	.	.	.	.	.	D	D	E	N	S	R	T	L	F	L	G	Y	S	V	A	G	Q	R	L	K	A	Q	F	A	Q	Q	G	R
Query Conservation																				.	.	.																			.							.	.	.	.	.	.
Alig confidence																				.	.	.																			.							.	.	.	.	.	.																											.	.
Template Conservation																																																																																.	.
Template Sequence		Q	K	M	N	V	F	R	M	K	L	L	G	A	N	V	I	P	V	N	S	G	S	R	T	L	K	D	A	I	N	E	A	L	R	D	W	V	A	T	F	E	Y	T	H	Y	L	I	G	S	V	V	G	P	H	P	Y	P	T	I	V	R	D	F	Q	S	V	I	G	R	E	A	K	A	Q	I	L	E	A	.	.
Template Known Secondary structure												T	T								S	T	T	S	S																T	T	T							S	S		S	S	T	T																								.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.					.	.	.	.	.	320										.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																																				.	.	.	.							.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.							.	.	.	.	.	.	.	.	.
Query Sequence		I	V	D	A	D	N	P	L	F	V	Y	L	P	C	G	V	G	G	G	P	G	G	V	A	F	G	L	K	L	A	F	G	D	H	V	H	C	F	F	A	E	P	T	H	S	P	C	M	L	L	.	.	.	.	G	V	H	T	G	L	.	.	.	.	.	.	.	.	.	H	D	Q	I	S	V	Q	D	I	G	I
Query Conservation																																																				.	.	.	.							.	.	.	.	.	.	.	.	.
Alig confidence		.	.																												.	.																				.	.	.	.							.	.	.	.	.	.	.	.	.
Template Conservation		.	.																												.	.
Template Sequence		.	.	E	G	Q	L	P	D	V	I	V	A	C	V	G	G	G	S	N	A	M	G	I	F	Y	P	F	V	N	.	.	D	K	K	V	K	L	V	G	V	E	A	G	G	K	G	L	E	S	G	K	H	S	A	S	L	N	A	G	Q	V	G	V	F	H	G	M	L	S	Y	F	L	Q	D	E	E	G	Q	I	K
Template Known Secondary structure		.	.		S	S			S							S	S	S								G	G	G	T	T	.	.		T	T	S										T	B	G	G	G	T	B	S													T	T							B		T	T	S		B
Template Predicted Secondary structure		.	.																												.	.
Template SS confidence
				215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	L	T	A	A	D	G	L	A	V	G	R	A	S	G	F	V	G	R	A	M	E	R	L	L	D	G	F	Y	T	L	S	D	Q	T	M	Y	D	M	L	G	W	L	A	Q	E	E	G	I	R	L	E	P	S	A	L	A	G	M	A	G	P	Q	R	V	C	A	S	V	S	Y	Q	Q	M	H	G	F	S	A
Query Conservation
Alig confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	H	S	I	A	P	G	L	D	Y	P	G	V	G	P	E	H	A	Y	L	K	K	I	Q	R	A	E	Y	V	T	V	T	D	E	E	A	L	K	A	F	H	E	L	S	R	T	E	G	I	I	P	A	L	E	S	A	H	A	V	A	Y	A	M	K	L	A	K	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						S	S	T	T	S			S	B											T	T	S																							S			B																	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	L	R	N	T	T	H	L	V	W	A	T	G	G	G	M	V	P	E	E	E	M	N	Q	Y	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	M	S	R	D	E	I	I	I	V	N	L	S	G	R	G	D	K	D	L	D	I	V	L	K	V	S	G
Template Known Secondary structure		T	S		T	T									B	B	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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