Job Description P00926 Confidence 100.00% Date Thu Jan 5 10:57:11 GMT 2012 Rank 9 Aligned Residues 316 % Identity 21% Template d1v71a1 SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 1.70

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	E	Q	D	V	Q	D	A	H	A	R	L	S	R	F	A	P	Y	L	A	K	A	F	P	E	T	A	A	T	G	G	I	I	E	S	E	L	V	A	I	P	A	M	Q	K	R	L	E	K	E	Y	Q	Q	P	I	S	G	Q	L	L	L	K	K	D	S	H	L	P	I	S	G	S	I	K	A	R	G	G	I
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.												.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.												.
Template Sequence		P	T	Y	D	D	V	A	S	A	S	E	R	I	K	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	K	T	P	V	L	T	S	S	T	V	N	K	E	F	V	A	.	.	.	.	.	.	.	.	E	V	F	F	K	C	E	N	F	Q	K	.	M	G	A	F	K	F	R	G	A	L
Template Known Secondary structure															T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																T	S	.	.	.	.	.	.	.	.							G	G	G	S	G	.	G	G	B	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.												.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.																	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	V	L	A	H	A	E	K	L	A	L	E	A	G	L	L	T	L	D	D	D	Y	S	K	L	L	S	P	E	F	K	Q	F	F	S	Q	Y	S	I	A	V	G	S	T	G	N	L	G	L	S	I	G	I	M	S	A	R	I	G	F	K	V	T	V	H	M	S	A	D	A	R	A	W	K	K	A	K	L	R
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	L	S	Q	L	N	E	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	A	G	V	L	T	F	S	S	G	N	H	A	Q	A	I	A	L	S	A	K	I	L	G	I	P	A	K	I	I	M	P	L	D	A	P	E	A	K	V	A	A	T	K
Template Known Secondary structure					T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S													T	T									T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.																										.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	G	V	T	V	V	E	Y	E	Q	D	Y	G	V	A	V	E	E	G	R	K	A	A	Q	S	D	P	N	C	F	F	I	D	D	E	N	S	R	T	L	F	L	G	Y	S	V	A	G	Q	R	L	K	A	Q	F	A	Q	Q	G	R	I	V	D	A	D	N	P	L	F	V	Y	L	P	C	G	V	G	G	G
Query Conservation
Alig confidence																															.																													.	.	.	.	.	.	.	.	.
Template Conservation																															.																													.	.	.	.	.	.	.	.	.
Template Sequence		G	Y	G	G	Q	V	I	M	Y	D	R	Y	K	D	D	R	E	K	M	A	K	E	I	S	E	R	E	G	L	.	T	I	I	P	P	Y	D	H	P	H	V	L	A	G	Q	G	T	A	A	K	E	L	F	E	E	V	G	P	.	.	.	.	.	.	.	.	.	L	D	A	L	F	V	C	L	G	G	G	G	L
Template Known Secondary structure			T	T								T	T	T	T														T		.	B				S	S	S	S								T													.	.	.	.	.	.	.	.	.		S							S	S	S
Template Predicted Secondary structure																															.																													.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.										.	.	.	.	.	180	.	.	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	G	V	A	F	G	L	K	L	A	F	G	D	H	V	H	C	F	F	A	E	P	T	H	S	P	C	M	L	L	G	V	H	T	G	L	H	D	Q	I	S	V	Q	D	I	G	I	D	N	L	T	A	A	D	G	L	A	V	G	R	A	S	G	F	V	G	R	A	M	E	R	L	L	D	G	F	Y	T	L
Query Conservation
Alig confidence												.																																.	.	.	.	.	.
Template Conservation												.																																.	.	.	.	.	.
Template Sequence		L	S	G	S	A	L	A	A	R	H	.	F	A	P	N	C	E	V	Y	G	V	E	P	E	A	G	N	D	G	Q	Q	S	F	R	K	G	S	I	V	H	I	D	.	.	.	.	.	.	T	P	K	T	I	A	D	G	A	Q	T	Q	H	L	G	N	Y	T	F	S	I	I	K	E	K	V	D	D	I	L	T	V
Template Known Secondary structure												.			T	T									G	G	G										T	S						.	.	.	.	.	.					S		T	T	S			S	S
Template Predicted Secondary structure												.																																.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.							.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	Q	T	M	Y	D	M	L	G	W	L	A	Q	E	E	G	I	R	L	E	P	S	A	L	A	G	M	A	G	P	Q	R	V	C	A	S	V	S	Y	Q	Q	M	H	G	F	S	A	E	Q	L	R	N	T	T	H	L	V	W	A	T	G	G	G	M	V	P	E	E	E	M	N	Q	Y	L	A	K
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		S	D	E	E	L	I	D	C	L	K	F	Y	A	A	R	M	K	I	V	V	E	P	T	G	C	L	S	F	A	A	A	R	A	M	K	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	L	K	N	K	R	I	G	I	I	I	S	G	G	N	.	V	D	I	E	R	Y	A	H	F	L	S	Q
Template Known Secondary structure																	T						G	G	G	G									T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	T									B			.											T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.														.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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