Job Description P00926 Confidence 100.00% Date Thu Jan 5 10:57:11 GMT 2012 Rank 37 Aligned Residues 296 % Identity 17% Template d1j0aa_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.50

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		61	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																																											.
Query SS confidence												.																																											.
Query Sequence		P	Y	L	A	K	A	F	P	E	T	.	A	A	T	G	G	I	I	E	S	E	L	V	A	I	P	A	M	Q	K	R	L	E	K	E	Y	Q	Q	P	I	S	G	Q	L	L	L	K	K	D	S	H	L	P	.	I	S	G	S	I	K	A	R	G	G	I	Y	E	V	L	A	H	A	E	K	L	A	L	E	A	G
Query Conservation												.																																											.
Alig confidence												.																								.	.	.	.	.	.	.	.												.																						.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.																																		.	.	.	.	.
Template Sequence		P	K	I	F	A	L	L	A	K	F	P	R	V	E	L	I	P	W	E	T	P	I	Q	Y	L	P	N	I	S	R	E	I	G	A	.	.	.	.	.	.	.	.	D	V	Y	I	K	R	D	D	L	T	G	L	G	I	G	G	N	K	I	R	K	L	E	Y	L	L	G	D	A	L	S	K	G	.	.	.	.	.
Template Known Secondary structure									T	T									S															T	S	.	.	.	.	.	.	.	.							G	G	G	S		S	T	T		S	T															T	T	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.																																		.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.									.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																													.	.																																						.
Query SS confidence																													.	.																																						.
Query Sequence		L	L	T	L	D	D	D	Y	S	K	L	L	S	P	E	F	K	Q	F	F	S	Q	Y	S	I	A	V	.	.	G	S	T	G	N	L	G	L	S	I	G	I	M	S	A	R	I	G	F	K	V	T	V	H	M	S	A	D	A	R	A	W	K	K	A	K	L	.	R	S	H	G	V	T	V	V	E	Y	E	Q	D
Query Conservation																													.	.																																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.																																						.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	V	V	I	T	V	G	A	V	H	S	N	H	A	F	V	T	G	L	A	A	K	K	L	G	L	D	A	I	L	V	L	R	G	K	E	E	L	K	G	N	Y	L	L	D	K	I	M	G	I	E	T	R	V	Y	D	A	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S								T	T														T	T									S				S										T	T							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
							216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																									.
Query SS confidence		.	.	.	.	.																									.
Query Sequence		.	.	.	.	.	Y	G	V	A	V	E	E	G	R	K	A	A	Q	S	D	P	N	C	F	F	I	D	D	E	.	N	S	R	T	L	F	L	G	Y	S	V	A	G	Q	R	L	K	A	Q	F	A	Q	Q	G	R	I	V	D	A	D	N	P	L	F	V	Y	L	P	C	G	V	G	G	G	P	G	G	V	A	F
Query Conservation		.	.	.	.	.																									.
Alig confidence		.	.	.	.	.																									.																						.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.
Template Sequence		D	S	F	E	L	M	K	Y	A	E	E	I	A	E	E	L	K	R	E	G	R	K	P	Y	V	I	P	P	G	G	A	S	P	I	G	T	L	G	Y	V	R	A	V	G	E	I	A	T	Q	S	E	.	.	.	.	.	.	.	.	V	K	F	D	S	I	V	V	A	A	G	S	G	G	T	L	A	G	L	S	L
Template Known Secondary structure		S	T	T	T													T	T	S	S								G	G	G		S					T															.	.	.	.	.	.	.	.				S							S	S	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.									180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	K	L	A	F	G	D	H	V	H	C	F	F	A	E	P	T	H	S	P	C	M	L	L	G	V	H	T	G	L	H	D	Q	I	S	V	Q	D	I	G	I	D	N	L	T	A	A	D	G	L	A	V	G	R	A	S	G	F	V	G	R	A	M	E	R	L	L	D	G	F	Y	T	L	S	D	Q	T	M	Y
Query Conservation
Alig confidence						.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	S	I	.	L	N	E	D	I	R	P	V	G	I	A	V	G	R	F	G	E	V	M	T	S	K	L	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	K	E	A	A	E	L	L	G	V	K	V	E	V	R	P	E	L	Y	D	Y	S	F	G	E	Y	G	K	I	T	G	E	V	A
Template Known Secondary structure						.	T	T											S	S		S	S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T					S								S	T	T	S	T	T
Template Predicted Secondary structure						.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.																230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		D	M	L	G	W	L	A	Q	E	E	G	I	R	L	E	P	.	S	A	L	A	G	M	A	G	P	Q	R	V	C	A	S	V	S	Y	Q	Q	M	H	G	F	S	A	E	Q	L	R	N	T	T	H	L	V	W	A	T	G	G
Query Conservation																		.
Alig confidence																		.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	I	I	R	K	V	G	T	R	E	G	I	I	L	D	P	V	Y	T	G	K	A	F	Y	G	L	V	D	L	A	R	K	G	.	.	.	.	.	.	.	.	.	.	.	.	E	L	G	E	K	I	L	F	I	H	T	G	G
Template Known Secondary structure												S					T	T	T														T	T	.	.	.	.	.	.	.	.	.	.	.	.		S		S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.													.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions