Job Description P00926 Confidence 100.00% Date Thu Jan 5 10:57:11 GMT 2012 Rank 39 Aligned Residues 290 % Identity 11% Template c3v7nA_ PDB info PDB header:lyase Chain: A: PDB Molecule:threonine synthase; PDBTitle: crystal structure of threonine synthase (thrc) from from burkholderia2 thailandensis Resolution 1.40 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		S	G	Q	L	L	L	K	K	D	S	H	L	P	I	S	G	S	I	K	A	R	G	G	I	Y	E	V	L	A	H	A	E	K	L	A	L	E	A	G	L	L	T	L	D	D	D	Y	S	K	L	L	S	P	E	F	K	Q	F	F	S	Q	Y	S	I	A	V	G	S	T	G	N	L	G	L	S	I	G	I	M	.
Query Conservation																																																																																	.
Alig confidence															.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation															.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	P	V	S	L	L	E	L	S	N	G	P	.	T	L	A	F	K	D	M	A	M	Q	L	L	G	N	L	F	E	Y	T	L	A	K	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	L	N	I	L	G	A	T	S	G	D	T	G	S	A	A	E	Y	A	M
Template Known Secondary structure		T											S	T	.	T	S	B	T																		T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S
Template Predicted Secondary structure															.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.						.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.																.	.	.																					.	.	.	.	.
Query SS confidence																	.																.	.	.																					.	.	.	.	.
Query Sequence		S	A	R	I	G	F	K	V	T	V	H	M	S	A	D	.	A	R	A	W	K	K	A	K	L	R	S	H	G	V	T	.	.	.	V	V	E	Y	E	Q	D	Y	G	V	A	V	E	E	G	R	K	A	A	Q	.	.	.	.	.	S	D	P	N	C	F	F	I	D	D	E	N	S	R	T	L	F	L	G	Y	S
Query Conservation																	.																.	.	.																					.	.	.	.	.
Alig confidence																	.																.	.	.																					.	.	.	.	.													.
Template Conservation																																																																									.
Template Sequence		R	G	K	E	G	V	R	V	F	M	L	S	P	H	K	K	M	S	A	F	Q	T	A	Q	M	Y	S	L	Q	D	P	N	I	F	N	L	A	V	N	G	V	F	D	D	C	Q	D	I	V	K	A	V	S	N	D	H	A	F	K	A	Q	Q	K	I	G	T	V	N	S	I	N	.	W	A	R	V	V	A	Q	V
Template Known Secondary structure		T	T		T	T									T	T		S										T				T	T								S														T								T	T					S	T	T		.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	G	Q	R	L	K	A	Q	F	A	Q	Q	G	R	I	V	D	A	D	N	P	L	F	V	Y	L	P	C	G	V	G	G	G	P	G	G	V	A	F	G	L	K	L	A	F	G	D	H	V	H	C	F	F	A	E	P	T	H	S	P	C	M	L	L	G	V	H	T	G	L	H	D	Q	I	S	V	Q	D	I
Query Conservation
Alig confidence																.	.	.	.	.																													.	.																															.
Template Conservation																.	.	.	.	.																													.	.																															.
Template Sequence		V	Y	Y	F	K	G	Y	F	A	A	T	R	S	N	.	.	.	.	.	D	E	R	V	S	F	T	V	P	S	G	N	F	G	N	V	C	A	G	H	I	A	R	M	M	G	L	P	.	.	I	E	K	L	V	V	A	T	N	E	N	D	V	L	D	E	F	F	R	T	G	A	Y	R	V	A	S	N	F	E	.
Template Known Secondary structure											T		S	S	T	.	.	.	.	.	T								G	G	G														T	T			.	.									T	T											S										.
Template Predicted Secondary structure																.	.	.	.	.																													.	.																															.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.																				350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	D	N	L	T	A	A	D	G	L	A	V	G	R	A	S	G	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	A	M	E	R	L	L	D	G	F	Y	T	L	S	D	Q	T	M	Y	D	M	L	G	W	L	A	Q	E	E	G	I	R	L	E	P	S	A	L	A	G
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	R	F	V	F	D	L	L	G	R	D	P	A	R	V	V	Q	L	F	R	D	V	E	Q	K	G	G	F	D	L	A	A	S	G	D	F	A	R	V	A	E	F	G	F	V	S	G	R	S	T	H	A	D	R	I	A	T	I	R	D	V	F	E	R	Y	R	T	M	I	D	T	H	T	A	D	G
Template Known Secondary structure		.	.	.	.	.							T	T	T																S				T	T	T	T	T		T						T	T																						S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	G	P	Q	R	V	C	A	S	V	S	Y	Q	Q	M	H	G	F	S	A	E	Q	L	R	N	T	T	H	L	V	W	A	T	G	G	G	M	V	P	E	E	E	M	N	Q	Y	L	A	K
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	V	A	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	R	P	G	V	P	M	V	V	L	E	T	A	Q	P	I	K	F	G	E	S	I	R	E	A	L	G	Q
Template Known Secondary structure						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			T	T	S								B		G	G	G	G									S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		411	.	.	.	.	.																.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions