Job Description P00926 Confidence 20.83% Date Thu Jan 5 10:57:11 GMT 2012 Rank 212 Aligned Residues 146 % Identity 14% Template c3pplB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of an aspartate transaminase (ncgl0237, cgl0240)2 from corynebacterium glutamicum atcc 13032 kitasato at 1.25 a3 resolution Resolution 1.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.															.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.							110	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.
Query Sequence		H	A	R	L	S	R	F	A	P	Y	L	A	K	A	F	P	E	T	A	A	T	G	G	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	E	L	V	A	I	P	A	M	Q	K	R	L	E	K	E	Y	Q	Q	P	I	S	G	Q	L	L	L	K	K	D	S	.	.	.	.	.	.	H	L	P
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	R	I	G	L	F	H	E	D	I	K	R	K	F	D	E	L	K	S	K	N	L	K	L	D	L	T	R	G	K	P	S	S	E	Q	L	D	F	A	D	E	L	L	A	L	P	G	K	G	D	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	D	G	T	D	V	R	N	Y	G	G
Template Known Secondary structure																						T																		T	T	G	G	G	G	G		S		T	T			B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S		B	T	T	S	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.																.	.	.	.	.	.	70	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	G	S	I	K	A	R	G	G	I	Y	E	V	L	A	H	A	E	K	L	A	L	E	A	G	L	L	T	L	D	D	D	Y	S	K	L	L	S	P	E	F	K	Q	F	F	S	Q	Y	S	I	A	V	G	S	T	G	N	L	G	L	S	I	G	I	M	S	A	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	G	I	V	D	I	R	Q	I	W	A	D	L	L	G	V	P	V	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	A	G	D	A	S	S	L	N	I	X	F	D	V	I	S	W	S	Y	I	F	G	N	N	D	S	V	Q	P
Template Known Secondary structure		S	S														T	S		G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S																			T	T		S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																														.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
			181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.	.
Predicted Secondary structure		.																																																						.	.	.
Query SS confidence		.																																																						.	.	.
Query Sequence		.	R	I	G	F	K	V	T	V	H	M	S	A	D	A	R	A	W	K	K	A	K	L	R	S	H	G	V	T	V	V	E	Y	E	Q	D	Y	G	V	A	V	E	E	G	R	K	A	A	Q	S	D	P	N	C	.	.	.	F	F	I	D	D	E	N	S	R
Query Conservation		.																																																						.	.	.
Alig confidence		.																																																						.	.	.
Template Conservation
Template Sequence		W	S	K	E	E	T	V	K	W	I	C	P	V	P	G	Y	D	R	H	F	S	I	T	E	R	F	G	F	E	X	I	S	V	P	X	N	E	D	G	P	D	X	D	A	V	E	E	L	V	K	N	P	Q	V	K	G	X	W	V	V	P	V	F	S	N	P
Template Known Secondary structure		G	G	G	S	S									S												T	T										T	T											T	T	S	T	T									S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions