Job Description P00926 Confidence 25.12% Date Thu Jan 5 10:57:11 GMT 2012 Rank 181 Aligned Residues 117 % Identity 15% Template c3ktdC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of a putative prephenate dehydrogenase (cgl0226)2 from corynebacterium glutamicum atcc 13032 at 2.60 a resolution Resolution 2.60 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	I	A	V	G	S	T	G	N	L	G	L	S	I	G	I	M	S	A	R	I	G	F	K	V	T	V	H	M	S	A	D	A	R	A	W	K	K	A	K	L	R	S	H	G	V	T	V	V	E	Y	E	Q	D	Y	G	V	A	V	E	E	G	R	K	A	A	Q	S	D	P	N	C	F	F	I	D	D	E	N
Query Conservation
Alig confidence																															.	.	.																			.	.	.	.	.	.																							.	.
Template Conservation																															.	.	.																			.	.	.	.	.	.																							.	.
Template Sequence		R	P	V	C	I	L	G	L	G	L	I	G	G	S	L	L	R	D	L	H	A	A	N	H	S	V	F	G	Y	.	.	.	N	R	S	R	S	G	A	K	S	A	V	D	E	G	F	D	V	S	.	.	.	.	.	.	A	D	L	E	A	T	L	Q	R	A	A	A	E	D	A	L	I	V	L	A	V	P	.	.
Template Known Secondary structure		S								S													T	T							.	.	.		S	S										T	T					.	.	.	.	.	.	S												T	T							S		.	.
Template Predicted Secondary structure																															.	.	.																			.	.	.	.	.	.																							.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.							.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	T	L	F	L	G	Y	S	V	A	G	Q	R	L	K	A	Q	F	A	Q	Q	G	R	I	V	D	A	D	N	P	L	F	V	Y	L	P	C	G	V	G	G	G	P	G	G	V	A	F	G	L	K	L	A	F	G	D	H	V	H	C	F	F	A	E	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.															.	.	.	.	.	.	.											.	.													.
Template Conservation		.	.	.	.	.	.	.	.															.	.	.	.	.	.	.											.	.													.
Template Sequence		.	.	.	.	.	.	.	.	X	T	A	I	D	S	L	L	D	A	V	H	T	H	.	.	.	.	.	.	.	A	P	N	N	G	F	T	D	V	V	.	.	S	V	K	T	A	V	Y	D	A	V	K	A	.	R	N	X	Q	H	R	Y	V	G	S	H	P
Template Known Secondary structure		.	.	.	.	.	.	.	.															.	.	.	.	.	.	.		T	T								.	.	S		S										.	T	T		G	G	G	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.															.	.	.	.	.	.	.											.	.													.
Template SS confidence
										77	.	.	80	.	.	.	.	.	.	.	.	.	90								.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions