 |
Job Description | P00926 | Confidence | 43.21% | Date | Thu Jan 5 10:57:11 GMT 2012 |
Rank | 110 | Aligned Residues | 93 |
% Identity | 13% | Template | c3gvpB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:adenosylhomocysteinase 3; |
PDBTitle: human sahh-like domain of human adenosylhomocysteinase 3
|
Resolution | 2.25 Å |
|
 |
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | S | Q | Y | S | I | A | V | G | S | T | G | N | L | G | L | S | I | G | I | M | S | A | R | I | G | F | K | V | T | V | H | M | S | A | D | A | R | A | W | K | K | A | K | L | R | S | H | G | V | T | V | V | E | Y | E | Q | D | Y | G | V | A | V | E | E | G | R | K | A | A | Q | S | D | P | N | C | F | F | I | D |
Query Conservation |   |
  |   |   |   |   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|
|   |   |   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|   |
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |
|   |
|   |   |
|   |
|   |
|   |   | . | . | . |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|   |   |
|
|
|
|
|   |   |
Template Sequence |   |
F | G | G | K | Q | V | V | V | C | G | Y | G | E | V | G | K | G | C | C | A | A | L | K | A | M | G | S | I | V | Y | V | T | E | I | D | . |
. |
. |
P | I | C | A | L | Q | A | C | M | D | G | F | R | L | V | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | N | E | V | I | R | Q | V | D | I | V | I | T | C |
Template Known Secondary structure |   |
| T | T |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S | . | . | . |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  | T | T | T |
| S |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | |
|
|
. | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 450 | . | . | . | . |
  |
  |   |
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | E | N | S | R | T | L | F | L | G | Y | S | V | A | G | Q | R | L | K | A | Q | F | A | Q | Q | G | R | I | V | D | A | D | N | P | L | F | V | Y | L | P | C | G | V | G | G |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|
|   |   |
|   |
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
| . | . | . | . | . | . | . |
|   |   |
|
|   |   |   |   |
|   |   |
| . | . | . | . | . | . | . | . | . | . |
|   |
|
|
|
|
|
|
|
|   |   |   |
Template Sequence |   |
T | G | . |
. |
. |
. |
. |
. |
. |
N | K | N | V | V | T | R | E | H | L | D | R | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | N | S | C | I | V | C | N | M | G | H | S | N |
Template Known Secondary structure |   |
S | S | . | . | . | . | . | . | . |
| S | S | S | B |
|  |  |  |  |  |  | S | . | . | . | . | . | . | . | . | . | . |
| T | T |  |  |  |  |  |
| S | S | T | T |
Template Predicted Secondary structure |   |
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
455 | . | |
|
|
|
|
|
|
. | . | . | 460 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
470 | . | . | . | . | . | . | . | . | . | 480 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|