Job Description P00926 Confidence 100.00% Date Thu Jan 5 10:57:11 GMT 2012 Rank 12 Aligned Residues 322 % Identity 19% Template c2zsjB_ PDB info PDB header:lyase Chain: B: PDB Molecule:threonine synthase; PDBTitle: crystal structure of threonine synthase from aquifex aeolicus vf5 Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	R	F	A	P	Y	L	A	K	A	F	P	E	T	A	A	T	G	G	I	I	E	S	E	L	V	A	I	P	A	M	Q	K	R	L	E	K	E	Y	Q	Q	P	I	S	G	Q	L	L	L	K	K	D	S	H	L	P	I	S	G	S	I	K	A	R	G	G	I	Y	E	V	L	A	H	A	E	K	L	A	L
Query Conservation
Alig confidence																																										.	.	.	.	.	.												.																					.	.
Template Conservation																																										.	.	.	.	.	.												.																					.	.
Template Sequence		I	K	Q	Y	K	K	Y	L	P	V	D	E	N	T	P	I	V	T	L	Y	E	G	N	T	P	L	I	E	A	D	N	L	A	R	A	I	G	F	K	G	.	.	.	.	.	.	K	I	Y	L	K	Y	E	G	L	N	P	.	T	G	S	F	K	D	R	G	M	T	L	A	I	S	K	A	V	E	A	G	.	.
Template Known Secondary structure					S	G	G	G	S	S			T	T	S																							T		S	S	.	.	.	.	.	.							G	G	G	S	T	.	T	S	B	T															T	T	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.												.																					.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.							.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		E	A	G	L	L	T	L	D	D	D	Y	S	K	L	L	S	P	E	F	K	Q	F	F	S	Q	Y	S	I	A	V	G	S	T	G	N	L	G	L	S	I	G	I	M	S	A	R	I	G	F	K	V	T	V	H	M	S	A	D	A	.	R	A	W	K	K	A	K	L	R	S	H	G	V	T	V	V	E	Y	E	Q
Query Conservation																																																													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	A	V	I	C	A	S	T	G	N	T	S	A	S	A	A	A	Y	A	A	R	A	G	L	R	A	Y	V	L	L	P	K	G	A	V	A	I	G	K	L	S	Q	A	M	I	Y	G	A	K	V	L	A	I	Q	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S							S	S													T	T									T	T	T			G	G	G	T						T	T							S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																										79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	G	V	A	V	E	E	G	R	K	A	A	Q	S	D	P	N	C	F	F	I	D	D	E	N	S	R	T	L	F	L	G	Y	S	V	A	G	Q	R	L	K	A	Q	F	A	Q	Q	G	R	I	V	D	A	D	N	P	L	F	V	Y	L	P	C	G	V	G	G	G	P	G	G	V	A	F	G	L	K	L	A
Query Conservation
Alig confidence																			.	.																														.	.	.	.	.	.	.	.
Template Conservation																			.	.																														.	.	.	.	.	.	.	.
Template Sequence		T	F	D	D	A	L	N	I	V	R	K	I	G	E	N	F	P	.	.	V	E	I	V	N	S	V	N	P	Y	R	I	E	G	Q	K	T	A	A	F	E	I	C	D	T	L	G	E	A	.	.	.	.	.	.	.	.	P	D	Y	H	F	I	P	V	G	N	A	G	N	I	T	A	Y	W	K	G	F	K	I	Y
Template Known Secondary structure																	S	S	.	.					S	T	T		T							T											S	S		.	.	.	.	.	.	.	.		S							S	S	S
Template Predicted Secondary structure																			.	.																														.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180									.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		295	.	.	.						.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.
Query SS confidence						.	.	.	.	.
Query Sequence		F	G	D	H	.	.	.	.	.	V	H	C	F	F	A	E	P	T	H	S	P	C	M	L	L	G	V	H	T	G	L	H	D	Q	I	S	V	Q	D	I	G	I	D	N	L	T	A	A	D	G	L	A	V	G	R	A	S	G	F	V	G	R	A	M	E	R	L	L	D	G	F	Y	T	L	S	D	Q	T	M	Y
Query Conservation						.	.	.	.	.
Alig confidence						.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	E	E	G	K	I	T	K	L	P	R	M	M	G	W	Q	A	E	G	A	A	P	I	V	K	G	Y	P	I	K	N	P	Q	T	I	A	.	.	.	.	.	.	.	.	.	.	T	A	I	K	I	G	N	P	Y	S	W	K	S	A	L	K	A	A	Q	E	S	G	G	K	I	D	A	V	S	D	S	E	I	L
Template Known Secondary structure				T	T	S		S	S										G	G	G						T	S			S	S				S		.	.	.	.	.	.	.	.	.	.	G	G	G			S	S		T	T												T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240											.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	L	G	W	L	A	Q	E	E	G	I	R	L	E	P	S	A	L	A	G	M	A	G	P	Q	R	V	C	A	S	V	S	Y	Q	Q	M	H	G	F	S	A	E	Q	L	R	N	T	T	H	L	V	W	A	T	G	G	G	M	V	P	E	E	E	M	N	Q	Y	L	A	K
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	A	Y	K	L	I	A	S	T	E	G	V	F	C	E	P	A	S	A	A	S	V	A	G	L	I	K	L	V	R	E	G	.	.	.	.	.	.	.	.	.	.	F	F	K	G	G	E	V	V	T	C	T	L	T	G	N	G	L	K	D	P	D	T	A	I	K	V	C	E	E
Template Known Secondary structure															B		G	G	G	G												T	T	.	.	.	.	.	.	.	.	.	.				S										B	B	G	G	G								T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.											.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions