Phyre 2 alignment of P00926 with c2q3bA

Job Description P00926
Confidence 100.00% Date Thu Jan 5 10:57:11 GMT 2012

Rank 31 Aligned Residues 282

% Identity 21% Template c2q3bA_

PDB info PDB header:transferase Chain: A: PDB Molecule:cysteine synthase a; PDBTitle: 1.8 a resolution crystal structure of o-acetylserine sulfhydrylase2 (oass) holoenzyme from mycobacterium tuberculosis

Resolution 1.80 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	I	E	S	E	L	V	A	I	P	A	M	Q	K	R	L	E	K	E	Y	Q	Q	P	I	S	G	Q	L	L	L	K	K	D	S	H	L	P	I	S	G	S	I	K	A	R	G	G	I	Y	E	V	L	A	H	A	E	K	L	A	L	E	A	G	L	L	T	L	D	D	D	Y	S	K	L	L	S	P	E	F	K
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.												.						.								.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.												.						.								.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	I	G	R	T	P	L	V	R	L	R	R	V	T	D	G	A	V	A	.	.	.	.	.	.	.	.	D	I	V	A	K	L	E	F	F	N	P	.	A	N	S	V	D	.	R	I	G	V	A	M	L	.	.	.	.	.	Q	A	A	E	Q	A	G	L	I	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure	S									S	S	S		T	T			S	.	.	.	.	.	.	.	.							G	G	G	S	T	.	T	S	B			.								.	.	.	.	.						T	T				T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.												.						.								.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.									.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.		.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.

	156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence	Q	F	F	S	Q	Y	S	I	A	V	G	S	T	G	N	L	G	L	S	I	G	I	M	S	A	R	I	G	F	K	V	T	V	H	M	S	A	D	A	R	A	W	K	K	A	K	L	R	S	H	G	V	T	V	V	E	Y	E	Q	.	.	D	Y	G	V	A	V	E	E	G	R	K	A	A	Q	S	D	P	N	C
Query Conservation																																																												.	.
Alig confidence	.	.	.	.																																																								.	.
Template Conservation	.	.	.	.
Template Sequence	.	.	.	.	D	T	I	I	L	E	P	T	S	G	N	T	G	I	A	L	A	M	V	C	A	A	R	G	Y	R	C	V	L	T	M	P	E	T	M	S	L	E	R	R	M	L	L	R	A	Y	G	A	E	L	I	L	T	P	G	A	D	G	M	S	G	A	I	A	K	A	E	E	L	A	K	T	D	Q	R	Y
Template Known Secondary structure	.	.	.	.	T								S	S														T									T	T	S											T	T								G	G	G																	T	T
Template Predicted Secondary structure	.	.	.	.
Template SS confidence
					64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

	234	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence	F	F	I	D	D	E	N	S	R	T	.	L	F	L	G	Y	S	V	A	G	Q	R	L	K	A	Q	F	A	Q	Q	G	R	I	V	D	A	D	N	P	L	F	V	Y	L	P	C	G	V	G	G	G	P	G	G	V	A	F	G	L	K	L	A	F	G	D	H	V	H	C	F	F	A	E	P	T	H	S	P	C	M
Query Conservation											.
Alig confidence											.																		.	.	.	.	.	.	.	.																										.
Template Conservation																													.	.	.	.	.	.	.	.																										.
Template Sequence	F	V	P	Q	Q	F	E	N	P	A	N	P	A	I	H	R	V	T	T	A	E	E	V	W	R	D	T	D	.	.	.	.	.	.	.	.	G	K	V	D	I	V	V	A	G	V	G	T	G	G	T	I	T	G	V	A	Q	V	I	K	E	.	R	K	P	S	A	R	F	V	A	V	E	P	A	A	S	P	V	L
Template Known Secondary structure					T	T	T		T									T									T	T	.	.	.	.	.	.	.	.	T										S	S	S													.			T	T									T	T	S		T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.																										.
Template SS confidence
	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.									.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

	313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	L	G	V	H	T	G	L	H	D	Q	I	S	V	Q	D	I	G	I	D	N	L	T	A	A	D	G	L	A	V	G	R	A	S	G	F	V	G	R	A	M	E	R	L	L	D	G	F	Y	T	L	S	D	Q	T	M	Y	D	M	L	G	W	L	A	Q	E	E	G	I	R	L	E	P	S	A	L	A	G	M	A
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Sequence	S	G	G	Q	K	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	I	Q	G	I	G	A	G	F	V	P	P	V	.	.	.	L	D	Q	D	L	V	D	E	I	I	T	V	G	N	E	D	A	L	N	V	A	R	R	L	A	R	E	E	G	L	L	V	G	I	S	S	G	A	A	T	V
Template Known Secondary structure	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S			S	S			T	T	.	.	.			G	G	G																								S			B
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template SS confidence
	211	.	.	.	.	.	.																.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

	393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	P	Q	R	V	C	A	S	V	S	Y	Q	Q	M	H	G	F	S	A	E	Q	L	R	N	T	T	H	L	V	W	A	T	G	G	G
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.
Template Sequence	A	A	L	Q	V	A	R	R	P	.	.	.	.	.	.	.	.	.	.	.	E	N	A	G	K	L	I	V	V	V	L	P	D	F	G
Template Known Secondary structure							T		G	.	.	.	.	.	.	.	.	.	.	.	G	G	T	T									B	B	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	273	.	.	.	.	.	.	280	.												.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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