Job Description P00926 Confidence 44.81% Date Thu Jan 5 10:57:11 GMT 2012 Rank 107 Aligned Residues 182 % Identity 18% Template c2o0rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rv0858c (n-succinyldiaminopimelate aminotransferase); PDBTitle: the three-dimensional structure of n-succinyldiaminopimelate2 aminotransferase from mycobacterium tuberculosis Resolution 2.00 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.									.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.
Query Sequence		A	R	L	S	R	F	A	P	Y	L	A	K	A	F	P	E	T	A	A	.	.	.	.	.	.	.	.	T	G	G	I	I	E	S	E	L	V	A	I	P	A	M	Q	K	R	L	E	K	E	Y	Q	Q	P	I	S	G	Q	L	L	L	K	K	D	S	H	L	P	I	S	G	S	I	K	A	R	G	G	I	Y	E
Query Conservation																					.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.															.	.	.	.	.
Template Sequence		A	T	V	S	R	L	R	P	Y	A	T	T	V	F	A	E	M	S	A	L	A	T	R	I	G	A	V	N	L	G	Q	G	F	P	D	E	D	G	P	P	K	M	L	Q	A	A	Q	D	A	I	A	G	G	.	.	.	.	.	.	.	.	V	N	Q	Y	P	P	G	P	G	S	A	P	L	R	.	.	.	.	.
Template Known Secondary structure					G	G	G	G	G	G	S	S												T	T	T				S	S		S	S		S	S																T	T	.	.	.	.	.	.	.	.			S				T	T							.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.															.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.									.	.	.	.	.	.	60	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A	H	A	E	K	L	A	L	E	A	G	L	L	T	L	D	D	D	Y	S	K	L	L	S	P	E	F	K	Q	F	F	S	Q	Y	S	I	A	V	G	S	T	G	N	L	G	L	S	I	G	I	M	S	A	R	I	G	F	K	V	T	V	H	M	S	A	D	A	R	A	W	K	K	A	K	L	R	S	H
Query Conservation
Alig confidence		.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation		.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		.	R	A	I	A	A	Q	R	R	R	H	F	G	V	D	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	T	E	V	L	V	T	V	G	A	T	E	A	I	A	A	A	V	L	.	G	L	V	E	P	G	S	E	V	L	L	I	E	P	F	Y	D	S	Y	S	P	V	V	A	M	A
Template Known Secondary structure		.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	S																	.					T	T								S			T	T								T
Template Predicted Secondary structure		.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
			68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.																	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.						.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		G	V	T	V	V	E	Y	.	.	.	.	.	E	Q	D	Y	G	V	A	V	E	E	G	R	K	A	A	Q	S	D	P	N	C	F	F	I	D	D	E	N	S	R	T	L	F	L	G	Y	S	V	A	G	Q	R	L	K	A	Q	F	A	Q	Q	G	R	I	V
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.
Template Conservation
Template Sequence		G	A	H	R	V	T	V	P	L	V	P	D	G	R	G	F	A	L	D	A	D	A	L	R	R	A	V	T	P	R	T	R	A	L	I	I	N	S	P	H	N	P	T	G	A	V	L	S	A	T	E	L	A	A	I	A	E	I	A	V	A	A	N	L	V	V
Template Known Secondary structure		T												T	T															T	T								S	S		T	T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions