Job Description P00926 Confidence 45.46% Date Thu Jan 5 10:57:11 GMT 2012 Rank 105 Aligned Residues 92 % Identity 25% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	A	H	A	R	L	S	R	F	A	P	Y	L	A	K	A	F	P	E	T	A	A	T	G	G	I	I	E	S	E	L	V	A	I	P	A	M	Q	K	R	L	E	K	E	Y	Q	Q	P	I	S	G	Q	L	L	L	K	K	D	S	H	L	P	I	S	G	S	I	K	A	R	G	G	I	Y	E	V	L	A	H
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.								.	.
Template Conservation																							.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.								.	.
Template Sequence		E	A	A	I	S	R	L	I	T	Y	L	R	I	L	E	E	L	E	A	Q	G	.	.	.	.	.	.	.	.	V	H	R	T	S	S	E	Q	L	G	G	L	A	Q	V	T	.	.	.	.	.	.	.	A	F	Q	V	R	K	D	.	.	L	S	Y	F	G	S	Y	G	T	R	G	V	G	Y	T	V	P	V	L
Template Known Secondary structure																					T	T	.	.	.	.	.	.	.	.														T	S		.	.	.	.	.	.	.								.	.				T	T					T	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.								.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.									.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.								.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	K	L	A	L	E	A	G	L	L	T	L	D	D	D	Y	S	K	L	L	S	P	E	F	K	Q	F	F	S	Q	Y	S	I	A	V	G	S	T	G	N	L	G	L	S	I	G
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	E	L	R	H	I	L	G	L	N	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	G	L	C	I	V	G	M	G	R	L	G	S	A	L	A
Template Known Secondary structure										T	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80																			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions