Job Description P33224 Confidence 99.94% Date Thu Jan 5 11:51:23 GMT 2012 Rank 62 Aligned Residues 211 % Identity 23% Template d2d29a2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 1.65

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	A	V	T	R	E	G	A	G	W	D	S	D	F	L	A	S	I	G	Q	Q	L	G	T	A	E	S	L	E	L	G	R	L	A	N	V	N	P	P	E	L	L	R	Y	D	A	Q	G	R	R	L	D	D	V	R	F	H	P	A	W	H	L	L	M	Q	A	L	C	T	N	R	V	H	N	L	A	W	E	E
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	Q	V	L	G	P	F	R	E	F	L	K	A	E	V	A	P	G	A	A	E	R	.	.	.	.	.	.	.	.	.	.	D	R	T	G	A	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	D	L	V	R	K	L	A	E	F	G	V	F	G	A	L	V	P	E
Template Known Secondary structure																	T	G	G	G					.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T	G	G	G	S	S	S		G
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.											.	.	.	.	.	.	40																						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		D	A	R	S	G	A	F	V	A	R	A	A	R	F	M	L	H	A	Q	V	E	A	.	.	.	.	G	S	L	C	P	I	T	M	T	F	A	A	T	P	L	L	L	Q	M	L	P	A	P	F	Q	D	W	T	T	P	L	L	S	D	R	Y	D	S	H	L	L	P	G	G	Q	K	R	G	L	L	I	G	M	G
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Y	G	G	A	G	L	S	T	R	L	F	A	R	M	V	E	A	I	A	Y	Y	D	G	A	L	A	L	T	V	A	S	H	N	S	L	A	T	G	H	I	L	L	A	G	S	E	A	Q	K	E	A	F	L	P	K	L	A	S	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	G	A	W	G
Template Known Secondary structure		G	G	T																																	T																							T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120														.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.					.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.																			.	.	.	.
Query SS confidence																																							.																			.	.	.	.
Query Sequence		M	T	E	K	Q	G	G	S	D	V	M	S	N	T	T	R	A	E	R	L	E	D	G	S	Y	R	L	V	G	H	K	W	F	F	S	V	P	.	Q	S	D	A	H	L	V	L	A	Q	T	A	G	G	L	S	C	F	.	.	.	.	F	V	P	R	F	L	P	D	G	Q	R	N	A	I	R	L	E	R	L	K
Query Conservation																																							.																			.	.	.	.
Alig confidence																									.														.																			.	.	.	.
Template Conservation																									.
Template Sequence		L	T	E	P	G	S	G	S	D	A	A	A	L	K	T	K	A	E	K	V	E	G	G	.	W	R	L	N	G	T	K	Q	F	I	T	Q	G	S	V	A	G	V	Y	V	V	M	A	R	T	D	P	P	P	S	P	E	R	K	H	Q	G	I	S	A	F	A	F	F	R	P	E	R	G	L	K	V	G	R	K	E
Template Known Secondary structure				B	T	T	B	S	S	S	G	G	G									T	T		.												T	T	T	T		S									S			S		G	G	G	T	T	T	T										S	S	S
Template Predicted Secondary structure																									.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		D	K	L	G	N	R	S	N	A	S	C	E	V	E	F	Q	D	A	I	G	W	.	.	.	L	L	G	L
Query Conservation																							.	.	.
Alig confidence																							.	.	.
Template Conservation
Template Sequence		E	K	L	G	L	T	A	S	D	T	A	Q	L	I	L	E	D	L	F	V	P	E	E	A	L	L	G	E
Template Known Secondary structure				S	S		T	T	S														G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions