Job Description P33224 Confidence 99.73% Date Thu Jan 5 11:51:23 GMT 2012 Rank 68 Aligned Residues 199 % Identity 17% Template d1u8va2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 1.60

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	R	R	L	D	D	V	R	F	H	P	A	W	H	L	L	M	Q	A	L	C	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	V	H	N	L	A	W	E	E	D	A	R	S	G	A	F	V	A	R	A	A	R	F	M	L	H	A	Q	V	E	A	G	S	L	C
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	G	E	K	I	E	N	W	V	D	H	P	M	I	R	P	S	I	N	C	V	R	M	T	Y	E	L	A	Q	D	P	Q	Y	A	D	L	M	T	T	K	S	N	L	I	G	K	T	I	N	R	F	A	N	L	H	Q	S	T	D	D	L	R	K	K	V	K	M	Q	R	L	L	G	Q	K	T	A	S	C	F	Q
Template Known Secondary structure		T	T				S	S	G	G	G		T	T	T																	T	T	T									T	T	T	S	S				G	G	G					S																			S	S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190									.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																															.	.																													.	.	.	.	.	.	.	.
Query SS confidence																															.	.																													.	.	.	.	.	.	.	.
Query Sequence		P	I	T	M	T	F	A	A	T	P	L	L	L	Q	M	L	P	A	P	F	Q	D	W	T	T	P	L	L	S	.	.	D	R	Y	D	S	H	L	L	P	G	G	Q	K	R	G	L	L	I	G	M	G	M	T	E	K	Q	G	G	.	.	.	.	.	.	.	.	S	D	V	M	S	N	T	T	R	A	E	R	L
Query Conservation																															.	.																													.	.	.	.	.	.	.	.
Alig confidence							.																								.	.												.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation							.																																					.	.	.	.
Template Sequence		R	C	V	G	M	.	D	A	F	N	A	V	F	S	T	T	Y	E	I	D	Q	K	Y	G	T	N	Y	H	K	N	F	T	E	Y	L	K	Y	I	Q	E	N	D	.	.	.	.	L	I	V	D	G	A	M	T	D	P	K	G	D	R	G	L	A	P	S	A	Q	K	D	P	D	L	F	L	R	I	V	E	K	R
Template Known Secondary structure		T					.																																				T	.	.	.	.												S		T	T	S		G	G	G		S	S	T	T	S	S
Template Predicted Secondary structure							.																																					.	.	.	.
Template SS confidence
		102	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																			.																	.																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																	.																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	D	G	S	Y	R	L	V	G	H	K	W	F	F	S	V	P	.	Q	S	D	A	H	L	V	L	A	Q	T	A	G	G	L	S	.	C	F	F	V	P	R	F	L	P	D	G	Q	R	N	A	I	R	L	E	R	L	K	D	K	L	G	N	R	S	N	A	S	C	E	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.																	.																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.														.																	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.
Template Sequence		E	D	G	.	I	V	V	R	G	A	K	A	H	Q	T	G	S	I	N	S	H	E	H	I	I	M	P	T	I	A	M	T	E	A	D	K	D	Y	A	V	S	F	A	C	P	S	D	A	D	G	L	F	M	I	Y	G	R	Q	S	C	D	T	R	K	M	E	E	G	A	D	I	D	L	G	N	K	Q	F	G	G
Template Known Secondary structure		S	S		.									S		T	T		T	T		S							S	S				G	G	G	G	G	G								T	T		T	T									T	T	G	G	G	G	G	S	T	T			G	G	G	S	S	S	S
Template Predicted Secondary structure					.
Template SS confidence
		177	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
						271	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	V	E	F	Q	D	A	I	G	W
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		Q	E	A	L	V	V	F	D	N	V	F	I	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions