Return to main results Retrieve Phyre Job Id

Job DescriptionP33224
Confidence89.47%DateThu Jan 5 11:51:23 GMT 2012
Rank69Aligned Residues98
% Identity14%Templated1u8va1
SCOP infoBromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Medium chain acyl-CoA dehydrogenase-like, C-terminal domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   299300.........310.........320.........330.........340.........350.........360.........370........
Predicted Secondary structure 













Query SS confidence 















































































Query Sequence  RFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFT
Query Conservation 
   
    
 
  

  
  

  
  

  
   
 
   

 
    





   

   
               
Alig confidence 



























.....








































.




Template Conservation 
      
    
 
 
 
   

  
 .....    





 


   
   
   

   
     
   
.     
Template Sequence  RQSYGGCKVGVGDVVIGAAALAADYNGA. . . . . QKASHVKDKLIEMTHLNETLYCCGIACSAEGYPTAAGNYQI. DLLLA
Template Known Secondary structure  T
.....TT
T

TTS

.
Template Predicted Secondary structure 

.....














.
Template SS confidence 















































































   293......300.........310.........320 .........330.........340.........350.........360. .....
 
   379380.........390.........400..
Predicted Secondary structure 

Query SS confidence 























Query Sequence  PAAKFVICKRGMPFVAEAMEVLGG
Query Conservation    

   
  
  
   
 

 

Alig confidence 























Template Conservation   
 
        
  


 

 

Template Sequence  NVCKQNITRFPYEIVRLAEDIAGG
Template Known Secondary structure  TT
T
Template Predicted Secondary structure 

Template SS confidence 























   367..370.........380.........390
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions