Job Description P33224 Confidence 99.90% Date Thu Jan 5 11:51:23 GMT 2012 Rank 67 Aligned Residues 212 % Identity 18% Template d1siqa2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 2.10

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	C	E	A	V	T	R	E	G	A	G	W	D	S	D	F	L	A	S	I	G	Q	Q	L	G	T	A	E	S	L	E	L	G	R	L	A	N	V	N	P	P	E	L	L	R	Y	D	A	Q	G	R	R	L	D	D	V	R	F	H	P	A	W	H	L	L	M	Q	A	L	C	T	N	R	V	H	N	L	A	W
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	E	I	L	I	R	D	T	F	R	T	Y	C	Q	E	R	L	M	P	R	I	L	L	A	.	.	.	.	.	.	.	.	.	.	N	R	N	E	V	F	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	I	I	S	E	M	G	E	L	G	V	L	G	P	T	I
Template Known Secondary structure																			T								.	.	.	.	.	.	.	.	.	.				T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T									T	T		S	S	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.											.	.	.	.	.	.	.																						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		E	E	D	A	R	S	G	A	F	V	A	R	A	A	R	F	M	L	H	A	Q	V	E	A	G	S	L	C	P	I	T	M	.	.	.	T	F	A	A	T	P	L	L	L	Q	M	L	P	A	P	F	Q	D	W	T	T	P	L	L	S	D	R	Y	D	S	H	L	L	P	G	G	Q	K	R	G	L	L	I	G	M
Query Conservation																																		.	.	.
Alig confidence																																		.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	Y	G	C	A	G	V	S	S	V	A	Y	G	L	L	A	R	E	L	E	R	V	D	S	G	Y	R	S	A	M	S	V	Q	S	S	L	V	M	H	P	I	Y	A	Y	G	S	E	E	Q	R	Q	K	Y	L	P	Q	L	A	K	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	G	C	F
Template Known Secondary structure				T	T																		T	T														T	T								S														T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.														.	130	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																											.														.
Query SS confidence																											.														.
Query Sequence		G	M	T	E	K	Q	G	G	S	D	V	M	S	N	T	T	R	A	E	R	L	E	D	G	S	.	Y	R	L	V	G	H	K	W	F	F	S	V	P	.	Q	S	D	A	H	L	V	L	A	Q	T	A	G	G	L	S	C	F	F	V	P	R	F	L	P	D	G	Q	R	N	A	I	R	L	E	R	L	K	D	K
Query Conservation																											.														.
Alig confidence																											.														.															.	.	.	.
Template Conservation																																																								.	.	.	.
Template Sequence		G	L	T	E	P	N	S	G	S	D	P	S	S	M	E	T	R	A	H	Y	N	S	S	N	K	S	Y	T	L	N	G	T	K	T	W	I	T	N	S	P	M	A	D	L	F	V	V	W	A	R	C	E	D	G	.	.	.	.	C	I	R	G	F	L	L	E	K	G	M	R	G	L	S	A	P	R	I	Q	G	K
Template Known Secondary structure					B	T	T	B	S	S		G	G	G									T	T	T	T													T	G	G	G		S									T	T	S	.	.	.	.									T	T		T	T					B
Template Predicted Secondary structure																																																								.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		L	G	N	R	S	N	A	S	C	E	V	E	F	Q	D	A	I	G	W	.	.	.	L	L	G	L	E	G
Query Conservation																					.	.	.
Alig confidence																					.	.	.
Template Conservation
Template Sequence		F	S	L	R	A	S	A	T	G	M	I	I	M	D	G	V	E	V	P	E	E	N	V	L	P	G	A	S
Template Known Secondary structure		S	S	S	T	T	S														G	G	G	B		T	T
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions