Job Description P33224 Confidence 99.94% Date Thu Jan 5 11:51:23 GMT 2012 Rank 64 Aligned Residues 218 % Identity 19% Template d1rx0a2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 1.77

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	N	L	Y	L	S	D	G	A	L	C	E	A	V	T	R	E	G	A	G	W	D	S	D	F	L	A	S	I	G	Q	Q	L	G	T	A	E	S	L	E	L	G	R	L	A	N	V	N	P	P	E	L	L	R	Y	D	A	Q	G	R	R	L	D	D	V	R	F	H	P	A	W	H	L	L	M	Q	A	L	C
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	M	G	L	N	E	E	Q	K	E	F	Q	K	V	A	F	D	F	A	A	R	E	M	A	P	N	M	A	E	W	D	Q	K	E	L	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	V	M	R	K	A	A
Template Known Secondary structure		T	T	T																				T											T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																																				.	.	.	.	.	.	.	60
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		T	N	R	V	H	N	L	A	W	E	E	D	A	R	S	G	A	F	V	A	R	A	A	R	F	M	L	H	A	Q	V	E	A	G	S	L	C	P	I	T	M	T	.	.	.	F	A	A	T	P	L	L	L	Q	M	L	P	A	P	F	Q	D	W	T	T	P	L	L	S	D	R	Y	D	S	H	L	L	P	G	G
Query Conservation																																												.	.	.
Alig confidence																																												.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	G	F	G	G	V	Y	I	Q	T	D	V	G	G	S	G	L	S	R	L	D	T	S	V	I	F	E	A	L	A	T	G	C	T	S	T	T	A	Y	I	S	I	H	N	M	C	A	W	M	I	D	S	F	G	N	E	E	Q	R	H	K	F	C	P	P	L	C	T	M	E	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T		S	S	T	T	S		G	G	G	T																		T	T																						S														T	T	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		Q	K	R	G	L	L	I	G	M	G	M	T	E	K	Q	G	G	S	D	V	M	S	N	T	T	R	A	E	R	L	E	D	G	S	Y	R	L	V	G	H	K	W	F	F	S	V	P	.	Q	S	D	A	H	L	V	L	A	Q	T	A	G	G	L	S	C	F	F	V	P	R	F	L	P	D	G	Q	R	N	A	I
Query Conservation																																																	.
Alig confidence		.	.	.	.																														.														.															.
Template Conservation		.	.	.	.																														.																													.
Template Sequence		.	.	.	.	K	F	A	S	Y	C	L	T	E	P	G	S	G	S	D	A	A	S	L	L	T	S	A	K	K	Q	G	D	H	.	Y	I	L	N	G	S	K	A	F	I	S	G	A	G	E	S	D	I	Y	V	V	M	C	R	T	G	G	P	.	G	P	K	G	I	S	C	I	V	V	E	K	G	T	P	G	L
Template Known Secondary structure		.	.	.	.	S								B	T	T	B	S	S	S	G	G	G									T	T		.												T	T	T	T		S								S	S	S	S	.	S	G	G	G								T	T		T	T
Template Predicted Secondary structure		.	.	.	.																														.																													.
Template SS confidence
						132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		R	L	E	R	L	K	D	K	L	G	N	R	S	N	A	S	C	E	V	E	F	Q	D	A	I	G	W	.	.	.	L	L	G	L	E
Query Conservation																													.	.	.
Alig confidence																													.	.	.
Template Conservation
Template Sequence		S	F	G	K	K	E	K	K	V	G	W	N	S	Q	P	T	R	A	V	I	F	E	D	C	A	V	P	V	A	N	R	I	G	S	E
Template Known Secondary structure										S	S		T	T	S														G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions