Job Description P33224 Confidence 99.94% Date Thu Jan 5 11:51:23 GMT 2012 Rank 59 Aligned Residues 177 % Identity 19% Template d1r2ja2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 2.10

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																											.	.																																											.
Query SS confidence																											.	.																																											.
Query Sequence		H	L	L	M	Q	A	L	C	T	N	R	V	H	N	L	A	W	E	E	D	A	R	S	G	A	.	.	F	V	A	R	A	A	R	F	M	L	H	A	Q	V	E	A	G	S	L	C	P	I	T	M	T	F	A	A	T	P	L	L	L	Q	M	L	P	A	P	F	Q	D	.	W	T	T	P	L	L	S	D	R	Y
Query Conservation																											.	.																																											.
Alig confidence																											.	.																																											.										.
Template Conservation																																																																																	.
Template Sequence		R	D	L	L	V	R	L	G	A	D	G	L	L	C	A	E	V	A	A	E	H	G	G	L	G	L	G	S	R	E	N	G	E	F	T	A	H	V	G	S	L	C	S	S	L	R	S	V	M	T	S	Q	G	M	A	A	W	T	V	Q	R	L	G	D	A	G	Q	R	A	T	F	L	K	E	L	T	S	G	L	.
Template Known Secondary structure											T	T	T	T	S	T	T	S		G	G	G	T																																									S												T	T				.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		D	S	H	L	L	P	G	G	Q	K	R	G	L	L	I	G	M	G	M	T	E	K	Q	G	G	S	D	V	M	S	N	T	T	R	A	E	R	L	E	D	G	S	Y	R	L	V	G	H	K	W	F	F	S	V	P	.	Q	S	D	A	H	L	V	L	A	Q	T	A	G	G	L	S	C	F	F	V	P	R	F	L
Query Conservation																																																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.														.																.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.																														.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	V	G	F	S	E	R	Q	A	G	S	D	L	S	A	M	R	T	R	V	R	L	D	G	D	T	.	A	V	V	D	G	H	K	V	W	T	T	A	A	A	Y	A	D	H	L	V	V	F	G	L	Q	E	D	G	S	.	.	.	.	G	A	V	V	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.							B	T	T	B	S	S		G	G	G									T	T		.											T	T	T	T	T		S							B		S	S	S		.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.																														.	.	.	.
Template SS confidence
																107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		P	D	G	Q	R	N	A	I	R	L	E	R	L	K	D	K	L	G	N	R	S	N	A	S	C	E	V	E	F	Q	D	A	I	G	W	.	.	.	L	L	G	L	E	G
Query Conservation																																					.	.	.
Alig confidence																																					.	.	.
Template Conservation
Template Sequence		V	P	A	D	T	P	G	V	R	V	E	R	V	P	K	P	S	G	C	R	A	A	G	H	A	D	L	H	L	D	Q	V	R	V	P	A	G	A	V	L	A	G	S	G
Template Known Secondary structure				T	T	S	T	T							S	S		S	S	S	T	T	S														G	G	G	B		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions