Job Description P33224 Confidence 100.00% Date Thu Jan 5 11:51:23 GMT 2012 Rank 13 Aligned Residues 377 % Identity 18% Template c3swoA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: crystal structure of a glutaryl-coa dehydrogenase from mycobacterium2 smegmatis in complex with fadh2 Resolution 1.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	L	N	N	S	N	L	Y	L	S	D	G	A	L	C	E	A	V	T	R	E	G	A	G	W	D	S	D	F	L	A	S	I	G	Q	Q	L	G	T	A	E	S	L	E	L	G	R	L	A	N	V	N	P	P	E	L	L	R	Y	D	A	Q	G	R	R	L	D	D	V	R	F	H	P	A	W	H	L	L	M
Query Conservation
Alig confidence																								.	.	.	.	.																				.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.																				.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	T	Y	A	P	L	E	L	F	D	T	D	R	L	L	D	Q	D	E	R	D	I	.	.	.	.	.	A	A	T	V	R	Q	F	V	D	T	R	L	K	P	N	V	E	G	W	.	F	E	S	A	T	L	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	A
Template Known Secondary structure											T	G	G	G	G	S								.	.	.	.	.												T								.				T				T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																								.	.	.	.	.																				.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.						.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.																							.	60	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.
Query SS confidence																																						.	.	.	.
Query Sequence		Q	A	L	C	T	N	R	V	H	N	L	A	W	E	E	D	A	R	S	G	A	F	V	A	R	A	A	R	F	M	L	H	A	Q	V	E	.	.	.	.	A	G	S	L	C	P	I	T	M	T	F	A	A	T	P	L	L	L	Q	M	L	P	A	P	F	Q	D	W	T	T	P	L	L	S	D	R	Y	D	S	H
Query Conservation																																						.	.	.	.
Alig confidence																.																						.	.	.	.																																					.	.	.	.
Template Conservation																.																																																														.	.	.	.
Template Sequence		K	E	F	G	N	L	G	V	L	G	M	H	L	Q	.	G	Y	G	C	A	G	T	N	A	V	S	Y	G	L	A	C	M	E	L	E	A	G	D	S	G	F	R	S	F	V	S	V	Q	G	S	L	S	M	F	S	I	Y	R	Y	G	S	E	E	Q	K	N	E	W	L	P	R	L	A	A	G	D	.	.	.	.
Template Known Secondary structure								T		T	T	T	T	S		.	S	T	T																															T	T	T																								T	S	.	.	.	.
Template Predicted Secondary structure																.																																																														.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		L	L	P	G	G	Q	K	R	G	L	L	I	G	M	G	M	T	E	K	Q	G	G	S	D	V	M	S	N	T	T	R	A	E	R	L	E	D	G	S	Y	R	L	V	G	H	K	W	F	F	S	V	P	.	Q	S	D	A	H	L	V	L	A	Q	T	A	G	G	L	S	C	F	F	V	P	R	F	L	P	D	G
Query Conservation																																																						.
Alig confidence		.	.	.	.	.	.	.	.	.																														.														.																					.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																														.																																			.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	A	I	G	C	F	G	L	T	E	P	D	F	G	S	N	P	A	G	M	R	T	R	A	R	R	D	G	S	D	.	W	I	L	N	G	T	K	M	W	I	T	N	G	N	L	A	D	V	A	T	V	W	A	Q	T	D	D	G	I	R	G	F	L	V	.	.	.	.	.	P	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	S								B	T	T	B	S	S		G	G	G									T	T		.												T	T	T	T		S							B		T	T	S							.	.	.	.	.		T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																														.																																			.	.	.	.	.
Template SS confidence
											137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.						200	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		Q	R	N	A	I	R	L	E	R	L	K	D	K	L	G	N	R	S	N	A	S	C	E	V	E	F	Q	D	A	I	G	W	.	.	.	L	L	G	L	E	G	E	G	I	R	L	I	L	K	M	G	G	M	T	R	F	D	C	A	L	G	S	H	A	M	M	R	R	A	F	S	L	A	I	Y	H	A	H	Q	R
Query Conservation																																		.	.	.
Alig confidence																																		.	.	.									.
Template Conservation																																													.
Template Sequence		D	T	P	G	F	T	A	N	E	I	H	R	K	L	S	L	R	A	S	V	T	S	E	L	V	L	D	N	V	R	L	P	A	S	A	Q	L	P	L	A	E	G	L	.	S	A	P	L	S	C	L	N	E	A	R	F	G	I	V	F	G	A	L	G	A	A	R	D	S	L	E	T	T	I	A	Y	T	Q	S	R
Template Known Secondary structure		T	S	T	T										S	S			S	S														G	G	G	B		T	T			S	T	.
Template Predicted Secondary structure																																													.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	F	G	N	P	L	I	Q	Q	P	L	M	R	H	V	L	S	R	M	A	L	Q	L	E	G	Q	T	A	L	L	F	R	L	A	R	A	W	D	R	R	A	D	A	K	E	A	L	W	A	R	L	F	T	P	A	A	K	F	V	I	C	K	R	G	M	P	F	V	A	E	A	M	E	V	L	G	G	I	G
Query Conservation
Alig confidence																																															.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.
Template Sequence		E	V	F	D	K	P	L	S	N	Y	Q	L	T	Q	E	K	L	A	N	M	T	V	E	L	G	K	G	M	L	L	A	I	H	L	G	R	I	K	D	A	E	G	V	R	P	.	.	.	.	.	.	E	Q	I	S	L	G	K	L	N	N	V	R	E	A	I	A	I	A	R	E	C	R	T	L	L	G	G	S	G
Template Known Secondary structure				T	T			G	G	G	S																														T	T					.	.	.	.	.	.																										G	G	G	G
Template Predicted Secondary structure																																															.	.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.							.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	C	E	E	S	E	L	P	R	L	Y	R	E	M	P	V	N	S	I	W	E	G	S	G	N	I	M	C	L	D	V	L	R	V	L	N	K	Q	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T	L	E	Y	S	P	L	R	H	A	N	N	L	E	S	V	L	T	Y	E	G	T	S	E	M	H	L	L	S	I	G	K	A	L	T	G	K	A	A
Template Known Secondary structure		G	S	S	S	S	T														S	S	S															S
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.