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Job DescriptionP33224
Confidence100.00%DateThu Jan 5 11:51:23 GMT 2012
Rank17Aligned Residues367
% Identity21%Templatec3sf6A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: crystal structure of glutaryl-coa dehydrogenase from mycobacterium2 smegmatis
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SDFLASIGQQLGTAESLELGRLA. . . . . NVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEEDARSGAF
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Template Sequence  ADDLIGIN. AVLSAEEREIRDTVRSVVQRRIKPHIASWYEDGELPA. . . . . . . . RELAVELGELGLLGMHLK. GYGCAGM
Template Known Secondary structure  T
G.GGS
TTTTT


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SSTTS
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Query Sequence  VARAARFMLHA. . . . QVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQKRGLLIGMGMTEKQGG
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Template Sequence  SAVAYGLACLELEAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDMASGH. . . . . . . . . . . . . RIGCFGLTEPDHG
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T

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BTTBS
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Query Sequence  SDVMSNTTRAERLEDGSYRLVGHKWFFSVP. QSDAHLVLAQTAGGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASC
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Template Sequence  SDPAGMRTRATRSGDD. WILTGTKMWITNGSVADVAVVWARTDEGIRGFVV. . . . . PTDTPGFTANTIKSKMSLRASVTS
Template Known Secondary structure  S
GGG


TT.TGGG
STT.....TTSTT

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Query Sequence  EVEFQDAIGW. . LLGLEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQ
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Template Sequence  ELVLDGVRLPDSARLPGATSLGAPLRCLNEARFGIVFGALGAARDCLETALAYACSREQFDRPIGGFQLTQQKLADMTLE
Template Known Secondary structure  GGGB
TT

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Query Sequence  LEGQTALLFRLARAWDRRADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGS
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Template Sequence  YGKGFLLALHLGRQKDAGELAP. . . . . . EQVSLGKLNNVREAIEIARTARTVLGASGITGEYPVMRHANNLESVLTYEGT
Template Known Secondary structure  T


......GGGGGSTTSSSSS
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   307..310.........320........ .330.........340.........350.........360.........370.........380
 
   428.430.........440.
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Query Sequence  GNIMCLDVLRVLNK
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Template Sequence  SEMHTLIIGQALTG
Template Known Secondary structure  S
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   381........390....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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