Job Description P33224 Confidence 100.00% Date Thu Jan 5 11:51:23 GMT 2012 Rank 38 Aligned Residues 316 % Identity 16% Template c3mxlB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nitrososynthase; PDBTitle: crystal structure of nitrososynthase from micromonospora carbonacea2 var. africana Resolution 3.15 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		H	L	L	M	Q	A	L	C	T	N	R	V	H	N	L	A	W	E	E	D	A	R	S	G	A	F	V	.	A	R	A	A	R	F	M	L	H	A	Q	V	E	A	G	S	L	C	P	I	T	M	T	F	A	A	T	P	L	L	L	Q	M	L	P	A	P	F	Q	D	W	T	T	P	L	L	S	D	R	Y	D	S
Query Conservation																													.
Alig confidence																													.																																																			.	.
Template Conservation																																																																																.	.
Template Sequence		V	E	A	F	E	Q	F	A	K	L	G	L	M	G	A	T	V	P	A	E	L	G	G	L	G	L	T	R	L	Y	D	V	A	T	A	L	M	R	L	A	E	A	D	A	S	T	A	L	A	W	H	V	Q	L	S	R	G	L	T	L	T	Y	E	W	Q	H	G	T	P	P	V	R	A	M	A	E	R	L	.	.
Template Known Secondary structure												T	G	G	G		S	S		T	T	T	T	S																		T	T																								S	S												.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		H	L	L	P	G	G	Q	K	R	G	L	L	I	G	M	G	M	T	E	K	Q	G	G	S	D	V	M	S	N	T	T	R	A	E	R	L	E	D	G	S	Y	R	L	V	G	H	K	W	F	F	S	V	P	.	Q	S	D	A	H	L	V	L	A	Q	T	A	G	G	L	S	C	F	F	V	P	R	F	L	P	D
Query Conservation																																																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.														.														.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.																												.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	A	M	A	E	G	E	A	A	V	C	G	A	L	K	D	A	P	G	V	V	T	.	W	L	L	S	G	R	K	V	L	V	S	M	A	P	I	A	T	H	F	F	V	H	A	Q	R	L	A	.	.	.	.	.	.	.	.	V	P	V	V	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	S								S	B		T	T				.											T	T		T	T								B				B	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.																												.	.	.	.	.	.	.	.
Template SS confidence
																		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.									170	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		G	Q	R	N	A	I	R	L	E	R	L	K	D	K	L	G	N	R	S	N	A	S	C	E	V	E	F	Q	D	A	I	G	W	.	.	.	L	L	G	L	E	G	E	G	I	R	L	I	L	K	M	G	G	M	T	R	F	D	C	A	L	G	S	H	A	M	M	R	R	A	F	S	L	A	I	Y	H	A	H	Q
Query Conservation																																			.	.	.
Alig confidence																																			.	.	.									.	.	.	.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		R	D	A	P	G	L	T	V	L	D	N	W	D	G	L	G	M	R	A	S	G	T	L	E	V	V	F	D	R	C	P	V	R	A	D	E	L	A	R	R	D	A	V	L	.	.	.	.	.	A	G	Q	T	V	S	S	I	T	M	L	G	I	Y	A	G	I	A	Q	A	A	R	D	I	A	V	G	F	C	A	G
Template Known Secondary structure		T	T		T	T										S	S		T	T	S														T	T						T	T			.	.	.	.	.								G	G	G																					T
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.						.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		R	H	V	F	G	N	P	L	I	Q	Q	P	L	M	R	H	V	L	S	R	M	A	L	Q	L	E	G	Q	T	A	L	L	F	R	L	A	R	A	W	D	.	R	R	A	D	A	K	E	A	L	W	A	R	L	F	T	P	A	A	K	F	V	I	C	K	R	G	M	P	F	V	A	E	A	M	E	V	L	G	G
Query Conservation																																										.
Alig confidence																																										.
Template Conservation
Template Sequence		R	G	G	E	P	R	A	G	A	R	A	L	V	A	G	L	D	T	R	L	Y	A	L	R	T	T	V	G	A	A	L	T	N	A	D	A	A	S	V	D	L	S	G	D	P	D	E	R	G	R	R	M	M	T	P	F	Q	Y	A	K	M	T	V	N	E	L	A	P	A	V	V	D	D	C	L	S	L	V	G	G
Template Known Secondary structure		T		S																																					S			S		T	T																																		G
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	Y	C	E	E	S	E	L	P	R	L	Y	R	E	M	P	V	N	S	I	W	E	G	S	G	N	I	M	C	L	D	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	Y	T	A	G	H	P	L	S	R	L	Y	R	D	V	R	A	G	G	F	M	Q	P	Y	S	Y	V	D	A	V	D	Y	L
Template Known Secondary structure		G	G	G	S	T	T	S									G	G	G	G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions