Job Description P33224 Confidence 100.00% Date Thu Jan 5 11:51:23 GMT 2012 Rank 29 Aligned Residues 373 % Identity 22% Template c3mpjG_ PDB info PDB header:oxidoreductase Chain: G: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: structure of the glutaryl-coenzyme a dehydrogenase Resolution 2.10 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	S	D	G	A	L	C	E	A	V	T	R	E	G	A	G	W	D	S	D	F	L	A	S	I	G	Q	Q	L	G	T	A	E	S	L	E	L	G	R	L	A	N	V	N	P	P	E	L	L	R	Y	D	A	Q	G	R	R	L	D	D	V	R	F	H	P	A	W	H	L	L	M	Q	A	L	C	T	N	R	V
Query Conservation
Alig confidence											.																					.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																					.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	N	L	S	K	E	L	Q	M	.	L	Q	K	E	V	R	N	F	V	N	K	K	I	V	P	F	A	D	Q	W	.	.	.	.	.	.	.	.	.	D	N	E	N	H	F	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	A	V	R	P	M	G	E	L	G	F
Template Known Secondary structure											.													T	T	T	T					.	.	.	.	.	.	.	.	.				T				T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T							T	T	T
Template Predicted Secondary structure											.																					.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.										.	.	.	.	.	.	.	.																						40	.	.	.	.	.	.	.	.	.	50	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.							.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.
Query Sequence		H	N	L	A	W	E	E	D	A	R	S	G	A	F	V	A	R	A	A	R	F	M	L	H	A	Q	V	E	A	G	S	L	C	P	I	T	M	T	F	A	A	.	.	.	.	.	.	T	P	L	L	L	Q	M	L	P	A	P	F	Q	D	W	T	T	P	L	L	S	D	R	Y	D	S	H	L	L	P	G	G	Q
Query Conservation																																											.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	T	V	I	P	E	E	Y	G	G	E	G	M	D	Q	G	W	L	A	A	M	I	V	T	E	E	I	A	R	G	S	S	A	L	R	V	Q	L	N	M	E	V	L	G	C	A	Y	T	I	L	T	Y	G	S	E	A	L	K	K	K	Y	V	P	K	L	S	S	A	E	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T		T	T	S		G	G	G	T	S				T	T																											T	T	T	T								S														T	T	S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.
Predicted Secondary structure																																																.																										.
Query SS confidence																																																.																										.
Query Sequence		K	R	G	L	L	I	G	M	G	M	T	E	K	Q	G	G	S	D	V	M	S	N	T	T	R	A	E	R	L	E	D	G	S	Y	R	L	V	G	H	K	W	F	F	S	V	P	.	Q	S	D	A	H	L	V	L	A	Q	T	A	G	G	L	S	C	F	F	V	P	R	F	L	P	.	D	G	Q	R	N	A	I
Query Conservation																																																.																										.
Alig confidence		.	.	.																														.														.																										.
Template Conservation		.	.	.																														.
Template Sequence		.	.	.	F	L	G	G	F	G	I	T	E	P	D	A	G	S	D	V	M	A	M	S	S	T	A	E	D	K	G	D	H	.	W	L	L	N	G	S	K	T	W	I	S	N	A	A	Q	A	D	V	L	I	Y	Y	A	Y	T	D	K	A	A	G	S	R	G	L	S	A	F	V	I	E	P	R	N	F	P	G	I
Template Known Secondary structure		.	.	.	S								B	T	T	B	S	S		G	G	G									S	S		.												T	T	T	T		S	S							S		S	T	T	G	G	G	S								T	T	T	S	T	T
Template Predicted Secondary structure		.	.	.																														.
Template SS confidence
					122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		R	L	E	R	L	K	D	K	L	G	N	R	S	N	A	S	C	E	V	E	F	Q	D	A	I	G	W	.	.	.	L	L	G	L	E	G	E	G	I	R	L	I	L	K	M	G	G	M	T	R	F	D	C	A	L	G	S	H	A	M	M	R	R	A	F	S	L	A	I	Y	H	A	H	Q	R	H	V	F	G	N
Query Conservation																													.	.	.
Alig confidence						.																							.	.	.
Template Conservation						.
Template Sequence		K	T	S	N	.	L	E	K	L	G	S	H	A	S	P	T	G	E	L	F	L	D	N	V	K	V	P	K	E	N	I	L	G	K	P	G	D	G	A	R	I	V	F	G	S	L	N	H	T	R	L	S	A	A	A	G	G	V	G	L	A	Q	A	C	L	D	A	A	I	K	Y	C	N	E	R	R	Q	F	G	K
Template Known Secondary structure						.				S	S		T	T	S														G	G	G			S	S	T	T																																										T	T
Template Predicted Secondary structure						.
Template SS confidence
		198	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	I	Q	Q	P	L	M	R	H	V	L	S	R	M	A	L	Q	L	E	G	Q	T	A	L	L	F	R	L	A	R	A	W	D	R	R	A	D	A	K	E	A	L	W	A	R	L	F	T	P	A	A	K	F	V	I	C	K	R	G	M	P	F	V	A	E	A	M	E	V	L	G	G	I	G	Y	C	E	E	S
Query Conservation
Alig confidence																																									.	.	.	.	.
Template Conservation																																									.	.	.	.	.
Template Sequence		P	I	G	D	F	Q	M	N	Q	D	M	I	A	Q	M	A	V	E	V	E	A	A	R	L	L	A	Y	K	A	A	A	A	K	D	E	G	R	L	N	.	.	.	.	.	N	G	L	D	V	A	M	A	K	Y	A	A	G	E	A	V	S	K	C	A	N	Y	A	M	R	I	L	G	A	Y	G	Y	S	T	E	Y
Template Known Secondary structure			G	G	G	S																														T	T		T	T	.	.	.	.	.	B																											G	G	G	T	S		T	T	S
Template Predicted Secondary structure																																									.	.	.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.						.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	P	R	L	Y	R	E	M	P	V	N	S	I	W	E	G	S	G	N	I	M	C	L	D	V	L	R	V	L	N	K	Q	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	A	R	F	Y	R	D	A	P	T	Y	Y	M	V	E	G	S	A	N	I	C	K	M	I	I	A	L	D	Q	L	G	V	R	K
Template Known Secondary structure		S								G	G	G	G	G	T	S	S	S														T	T	S
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.