Job Description P33224 Confidence 100.00% Date Thu Jan 5 11:51:23 GMT 2012 Rank 16 Aligned Residues 383 % Identity 19% Template c2wbiB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase family member 11; PDBTitle: crystal structure of human acyl-coa dehydrogenase 11 Resolution 2.80 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	G	A	L	C	E	A	V	T	R	E	G	A	G	W	D	S	D	F	L	A	S	I	G	Q	Q	L	G	T	A	E	S	L	E	L	G	R	L	A	N	V	N	P	P	E	L	L	R	Y	D	A	Q	G	R	R	L	D	D	V	R	F	H	P	A	W	H	L	L	M	Q	A	L	C	T	N	R	V	H	N
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Q	T	R	K	G	Q	E	V	L	I	K	V	K	H	F	M	K	Q	H	I	L	P	A	E	K	E	V	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Y	V	Q	N	E	N	S	V	D	K	W	G	K	P	L	V	I	D	K	L	K	E	M	A	K	V	E	G	L	W	N
Template Known Secondary structure																					T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T		S	S			S															T	T		S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		L	A	W	E	E	D	A	R	S	G	A	F	V	A	R	A	A	R	F	M	L	H	A	.	.	Q	V	E	A	G	S	L	C	P	I	T	M	T	F	A	A	T	P	L	L	L	Q	M	L	P	A	P	F	Q	D	W	T	T	P	L	L	S	D	R	Y	D	S	H	L	L	P	G	G	Q	K	R	G	L	L	I
Query Conservation																									.	.
Alig confidence																									.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	F	L	P	A	V	S	G	L	S	H	V	D	Y	A	L	I	A	E	E	T	G	K	C	F	F	A	P	D	V	F	N	C	Q	A	P	D	T	G	N	M	E	V	L	H	L	Y	G	S	E	E	Q	K	K	Q	W	L	E	P	L	L	Q	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	S
Template Known Secondary structure		T	T																				T	T	S	T	T					T	T			T	T																				T							T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.														.	.	150
		181	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure										.																															.	.	.
Query SS confidence										.																															.	.	.
Query Sequence		G	M	G	M	T	E	K	Q	.	G	G	S	D	V	M	S	N	T	T	R	A	E	R	L	E	D	G	S	Y	R	L	V	G	H	K	W	F	F	S	.	.	.	V	P	Q	S	D	A	H	L	V	L	A	Q	T	A	G	G	L	S	C	F	F	V	P	R	F	L	P	D	G	Q	R	N	A	I	R	L	E	R
Query Conservation										.																															.	.	.
Alig confidence										.																			.												.	.	.																				.	.	.
Template Conservation																													.																																		.	.	.
Template Sequence		C	F	C	M	T	E	P	D	V	A	S	S	D	A	T	N	I	E	C	S	I	Q	R	D	E	D	S	.	Y	V	I	N	G	K	K	W	W	S	S	G	A	G	N	P	K	C	K	I	A	I	V	L	G	R	T	Q	N	T	S	Q	H	.	.	.	S	M	I	L	V	P	M	N	T	P	G	V	K	I	I	R
Template Known Secondary structure								T	T	S		T	T	S	G	G	G									T	T		.												T	T	T	S	T	T																	.	.	.							T	T	S	T	T
Template Predicted Secondary structure																													.																																		.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure											.	.	.															.	.	.
Query SS confidence											.	.	.															.	.	.
Query Sequence		L	K	D	K	L	G	N	R	S	.	.	.	N	A	S	C	E	V	E	F	Q	D	A	I	G	W	.	.	.	L	L	G	L	E	G	E	G	I	R	L	I	L	K	M	G	G	M	T	R	F	D	C	A	L	G	S	H	A	M	M	R	R	A	F	S	L	A	I	Y	H	A	H	Q	R	H	V	F	G	N	P
Query Conservation											.	.	.															.	.	.
Alig confidence											.	.	.															.	.	.
Template Conservation
Template Sequence		P	L	S	V	F	G	Y	T	D	N	F	H	G	G	H	F	E	I	H	F	N	Q	V	R	V	P	A	T	N	L	I	L	G	E	G	R	G	F	E	I	S	Q	G	R	L	G	P	G	R	I	H	H	C	M	R	T	V	G	L	A	E	R	A	L	Q	I	M	C	E	R	A	T	Q	R	I	A	F	K	K	K
Template Known Secondary structure					B	T	T	B			G	G	G															G	G	G	B		S		T	T																																										T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	Q	Q	P	L	M	R	H	V	L	S	R	M	A	L	Q	L	E	G	Q	T	A	L	L	F	R	L	A	R	A	W	D	R	R	A	D	A	K	E	A	L	W	A	R	L	F	T	P	A	A	K	F	V	I	C	K	R	G	M	P	F	V	A	E	A	M	E	V	L	G	G	I	G	Y	C	E	E	S	E
Query Conservation
Alig confidence																																			.	.	.	.
Template Conservation																																			.	.	.	.
Template Sequence		L	Y	A	H	E	V	V	A	H	W	I	A	E	S	R	I	A	I	E	K	I	R	L	L	T	L	K	A	A	H	S	M	D	.	.	.	.	T	L	G	S	A	G	A	K	K	E	I	A	M	I	K	V	A	A	P	R	A	V	S	K	I	V	D	W	A	I	Q	V	C	G	G	A	G	V	S	Q	D	Y	P
Template Known Secondary structure		G	G	G	S																														.	.	.	.							T																										T	G	G	G	G	G	S	T	T	S	S
Template Predicted Secondary structure																																			.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.					.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	R	L	Y	R	E	M	P	V	N	S	I	W	E	G	S	G	N	I	M	C	L	D	V	L	R	V	L	N	K	Q	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	N	M	Y	A	I	T	R	V	L	R	L	A	D	G	P	D	E	V	H	L	S	A	I	A	T	M	E	L	R	D	Q	A
Template Known Secondary structure													T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.