Job Description P33224 Confidence 100.00% Date Thu Jan 5 11:51:23 GMT 2012 Rank 10 Aligned Residues 331 % Identity 23% Template c2pg0B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase from geobacillus2 kaustophilus Resolution 1.80 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																											.	.																																		.
Query SS confidence																											.	.																																		.
Query Sequence		H	L	L	M	Q	A	L	C	T	N	R	V	H	N	L	A	W	E	E	D	A	R	S	G	A	.	.	F	V	A	R	A	A	R	F	M	L	H	A	Q	V	E	A	G	S	L	C	P	I	T	M	T	F	A	A	T	P	L	L	L	.	Q	M	L	P	A	P	F	Q	D	W	T	T	P	L	L	S	D	R	Y
Query Conservation																											.	.																																		.
Alig confidence																											.	.																																		.																			.
Template Conservation																																																																																	.
Template Sequence		R	S	F	W	A	K	M	G	E	N	G	F	L	C	P	W	V	D	E	K	Y	G	G	L	N	A	D	F	A	Y	S	V	V	I	N	E	E	L	E	K	V	G	S	S	L	V	G	I	G	L	H	N	D	I	V	T	P	Y	I	A	S	Y	G	T	E	E	Q	K	Q	K	W	L	P	K	C	V	T	G	E	.
Template Known Secondary structure											T	T		S	S	T	T	S		G	G	G	T																					G	G	G									T	T																							T	S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																									.												.	.
Query SS confidence																																																									.												.	.
Query Sequence		D	S	H	L	L	P	G	G	Q	K	R	G	L	L	I	G	M	G	M	T	E	K	Q	G	G	S	D	V	M	S	N	T	T	R	A	E	R	L	E	D	G	S	Y	R	L	V	G	H	K	W	F	F	S	V	P	.	Q	S	D	A	H	L	V	L	A	Q	T	.	.	A	G	G	L	S	C	F	F	V	P	R
Query Conservation																																																									.												.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																														.														.												.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	L	I	T	A	I	A	M	T	E	P	G	A	G	S	D	L	A	N	I	S	T	T	A	V	K	D	G	D	Y	.	Y	I	V	N	G	Q	K	T	F	I	T	N	G	I	H	A	D	L	I	V	V	A	C	K	T	D	P	Q	A	K	P	P	H	R	G	I	S	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	S								B	T	T	B	S	S		G	G	G									T	T		.											T	T	T	T	T		S								S		T	T		S	S	G	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
														123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		F	L	P	D	G	Q	R	N	A	I	R	L	E	R	L	K	D	K	L	G	N	R	S	N	A	S	C	E	V	E	F	Q	D	A	I	G	W	.	.	.	L	L	G	L	E	G	E	G	I	R	L	I	L	K	M	G	G	M	T	R	F	D	C	A	L	G	S	H	A	M	M	R	R	A	F	S	L	A	I	Y
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.
Template Conservation
Template Sequence		L	V	V	E	R	D	T	P	G	F	T	R	G	R	K	L	E	K	V	G	L	H	A	Q	D	T	A	E	L	F	F	Q	D	A	K	V	P	A	Y	N	L	L	G	E	E	G	K	G	F	Y	Y	L	M	E	K	L	Q	Q	E	R	L	V	V	A	I	A	A	Q	T	A	A	E	V	M	F	S	L	T	K	Q
Template Known Secondary structure						T	T		T	T										S	S		T	T	S														G	G	G			S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	H	Q	R	H	V	F	G	N	P	L	I	Q	Q	P	L	M	R	H	V	L	S	R	M	A	L	Q	L	E	G	Q	T	A	L	L	F	R	L	A	R	A	W	D	R	R	A	D	A	K	E	A	L	W	A	R	L	F	T	P	A	A	K	F	V	I	C	K	R	G	M	P	F	V	A	E	A	M	E	V
Query Conservation
Alig confidence																																																				.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		Y	V	K	Q	R	T	A	F	G	K	R	V	S	E	F	Q	T	V	Q	F	R	L	A	E	M	A	T	E	I	A	L	G	R	T	F	V	D	R	V	I	E	E	H	M	A	G	K	Q	I	V	.	.	.	.	.	.	T	E	V	S	M	A	K	W	W	I	T	E	M	A	K	R	V	A	A	E	A	M	Q	L
Template Known Secondary structure									T	T			G	G	G	S																														T	T					.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.							320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	G	I	G	Y	C	E	E	S	E	L	P	R	L	Y	R	E	M	P	V	N	S	I	W	E	G	S	G	N	I	M	C	L	D	V	L	R	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	G	G	Y	G	Y	M	E	E	Y	E	I	A	R	R	Y	R	D	I	P	V	S	A	I	Y	A	G	T	N	E	M	M	K	T	I	I	A	R	Q	L
Template Known Secondary structure		T	G	G	G	G	G		T	T	S									G	G	G	G	G	T	S	S	S													T
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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