Job Description P33224 Confidence 100.00% Date Thu Jan 5 11:51:23 GMT 2012 Rank 5 Aligned Residues 383 % Identity 15% Template c2ix5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coenzyme a oxidase 4, peroxisomal; PDBTitle: short chain specific acyl-coa oxidase from arabidopsis2 thaliana, acx4 in complex with acetoacetyl-coa Resolution 2.7 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		N	Q	P	I	P	L	N	N	S	N	L	Y	L	S	D	.	G	A	L	C	E	A	V	T	R	E	G	A	G	W	D	S	D	F	L	A	S	I	G	Q	Q	L	G	T	A	E	S	L	E	L	G	R	L	A	N	V	N	P	P	E	L	L	R	Y	D	A	Q	G	R	R	L	D	D	V	R	F	H	P	A	W
Query Conservation																	.
Alig confidence																	.																											.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	P	P	C	T	S	D	Y	Y	H	F	N	D	L	L	T	P	E	E	Q	A	I	R	K	K	V	R	E	C	M	E	K	E	V	A	P	I	M	T	E	Y	.	.	.	.	.	.	.	.	.	.	W	E	K	A	E	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S						S		T	T		G	G	G	G	S																			T								.	.	.	.	.	.	.	.	.	.				T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.											.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		H	L	L	M	Q	A	L	C	T	N	R	V	H	N	L	A	W	E	E	D	A	R	S	G	A	F	V	A	R	A	A	R	F	M	L	H	A	Q	V	E	A	G	S	L	C	P	I	T	M	T	F	.	.	.	.	A	A	T	P	L	L	L	Q	M	L	P	A	P	F	Q	D	W	T	T	P	L	L	S	D	R
Query Conservation																																																					.	.	.	.
Alig confidence																				.																																	.	.	.	.
Template Conservation																				.
Template Sequence		F	H	I	T	P	K	L	G	A	M	G	V	A	G	G	S	I	K	.	G	Y	G	C	P	G	L	S	I	T	A	N	A	I	A	T	A	E	I	A	R	V	D	A	S	C	S	T	F	I	L	V	H	S	S	L	G	M	L	T	I	A	L	C	G	S	E	A	Q	K	E	K	Y	L	P	S	L	A	Q	L	N
Template Known Secondary structure		G	G	G						T	T	T		T	T	T	T			.	S	T	T																																T	T									S														T	T	S
Template Predicted Secondary structure																				.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		Y	D	S	H	L	L	P	G	G	Q	K	R	G	L	L	I	G	M	G	M	T	E	K	Q	G	G	S	D	V	M	S	N	T	T	R	A	E	R	L	E	D	G	S	Y	R	L	V	G	H	K	W	F	F	S	V	P	.	Q	S	D	A	H	L	V	L	A	Q	T	A	G	G	L	S	C	F	F	V	P	R	F
Query Conservation																																																										.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																														.														.																	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																														.																															.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	A	C	W	A	L	T	E	P	D	N	G	S	D	A	S	G	L	G	T	T	A	T	K	V	E	G	G	.	W	K	I	N	G	Q	K	R	W	I	G	N	S	T	F	A	D	L	L	I	I	F	A	R	N	T	T	T	N	Q	.	.	.	I	N	G	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	S								B	T	T	B	S	S		G	G	G									T	T		.												T	T	T	T		S									T	T	T	S	S	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																														.																															.	.	.
Template SS confidence
															168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.	230
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		L	P	D	G	Q	R	N	A	I	R	L	E	R	L	K	D	K	L	G	N	R	S	N	A	S	C	E	V	E	F	Q	D	A	I	G	W	.	.	.	L	L	G	L	E	G	E	G	I	R	L	I	L	K	M	G	G	M	T	R	F	D	C	A	L	G	S	H	A	M	M	R	R	A	F	S	L	A	I	Y	H
Query Conservation																																						.	.	.
Alig confidence																																						.	.	.									.
Template Conservation																																																	.
Template Sequence		I	V	K	K	D	A	P	G	L	K	A	T	K	I	P	N	K	I	G	L	R	M	V	Q	N	G	D	I	L	L	Q	N	V	F	V	P	D	E	D	R	L	P	G	V	N	S	F	.	Q	D	T	S	K	V	L	A	V	S	R	V	M	V	A	W	Q	P	I	G	I	S	M	G	I	Y	D	M	C	H	R	Y
Template Known Secondary structure					T	T		T	T										S	S	S	T	T	S														G	G	G	B		T	T		S	S		.
Template Predicted Secondary structure																																																	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	Q	R	H	V	F	G	N	P	L	I	Q	Q	P	L	M	R	H	V	L	S	R	M	A	L	Q	L	E	G	Q	T	A	L	L	F	R	L	A	R	A	W	D	R	R	A	D	A	K	E	A	L	W	A	R	L	F	T	P	A	A	K	F	V	I	C	K	R	G	M	P	F	V	A	E	A	M	E	V	L
Query Conservation
Alig confidence																																																			.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.
Template Sequence		L	K	E	R	K	Q	F	G	A	P	L	A	A	F	Q	L	N	Q	Q	K	L	V	Q	M	L	G	N	V	Q	A	M	F	L	M	G	W	R	L	C	K	L	Y	E	T	G	Q	M	T	P	.	.	.	.	.	.	G	Q	A	S	L	G	K	A	W	I	S	S	K	A	R	E	T	A	S	L	G	R	E	L	L
Template Known Secondary structure								T	T			G	G	G	S																														T	T					.	.	.	.	.	.																									T
Template Predicted Secondary structure																																																			.	.	.	.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.							.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	I	G	Y	C	E	E	S	E	L	P	R	L	Y	R	E	M	P	V	N	S	I	W	E	G	S	G	N	I	M	C	L	D	V	L	R	V	L	N	K	Q	A	G	V	Y	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	N	G	I	L	A	D	F	L	V	A	K	A	F	C	D	L	E	P	I	Y	T	Y	E	G	T	Y	D	I	N	T	L	V	T	G	R	E	V	T	G	I	A	S	F	K	P	A
Template Known Secondary structure		G	G	G	G	G		G	G	G	S														S	S	S															S					S
Template Predicted Secondary structure
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.