Job Description P33224 Confidence 100.00% Date Thu Jan 5 11:51:23 GMT 2012 Rank 8 Aligned Residues 383 % Identity 20% Template c2fonA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:peroxisomal acyl-coa oxidase 1a; PDBTitle: x-ray crystal structure of leacx1, an acyl-coa oxidase from2 lycopersicon esculentum (tomato) Resolution 2.74 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		T	R	E	G	A	G	W	D	S	D	F	L	A	S	I	.	.	G	Q	Q	L	G	T	A	E	S	L	E	L	G	R	L	A	N	V	N	P	P	E	L	L	R	Y	D	A	Q	G	R	R	L	D	D	V	R	F	H	P	A	W	H	L	L	M	Q	A	L	C	T	N	R	V	H	N	L	A	W	E	E	D	A
Query Conservation																	.	.
Alig confidence																	.	.																				.														.	.	.	.	.	.	.	.	.
Template Conservation																																						.														.	.	.	.	.	.	.	.	.
Template Sequence		E	R	K	K	A	G	F	D	V	D	E	M	K	I	V	W	A	G	S	R	H	D	F	E	L	T	D	R	I	S	K	L	V	A	S	D	.	P	G	F	S	K	E	G	R	T	M	L	P	R	.	.	.	.	.	.	.	.	.	K	E	L	F	K	N	T	L	R	K	A	A	Y	A	W	K	R	I	I	E	L
Template Known Secondary structure				T	T			S											T	S																T		.	G	G	G			T	T	G	G	G	S			.	.	.	.	.	.	.	.	.																					T
Template Predicted Secondary structure																																						.														.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	G	A	F	V	A	R	A	A	R	F	M	L	H	A	Q	V	E	A	G	S	L	C	P	I	T	M	T	F	A	A	T	P	L	L	L	Q	M	L	P	A	P	F	Q	D	W	T	T	P	L	L	S	D	R	Y	D	S	H	L	L	P	G	G	Q	K	R	G	L	L	I	G	M	G	M	T	E	K	Q	G
Query Conservation
Alig confidence																																.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	S	Q	E	E	A	T	M	L	R	R	Y	V	D	E	P	A	F	T	D	L	H	W	G	M	F	I	P	A	.	.	.	.	I	K	G	Q	G	T	D	K	Q	Q	E	K	W	L	P	L	A	Y	K	M	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	G	C	Y	A	Q	T	E	L	G	H
Template Known Secondary structure		T																		T							T					.	.	.	.					S														T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S								B	S	S
Template Predicted Secondary structure																																.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130														.	.	.	.	.	.	.	.	.	140	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.						.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.						.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.
Predicted Secondary structure																			.						.	.	.	.	.										.	.														.	.	.	.	.														.	.
Query SS confidence																			.						.	.	.	.	.										.	.														.	.	.	.	.														.	.
Query Sequence		G	S	D	V	M	S	N	T	T	R	A	E	R	L	E	D	G	.	S	Y	R	L	V	.	.	.	.	.	G	H	K	W	F	F	S	V	P	.	.	Q	S	D	A	H	L	V	L	A	Q	T	A	G	.	.	.	.	.	G	L	S	C	F	F	V	P	R	F	L	P	D	.	.	G	Q	R	N	A	I	R	L
Query Conservation																			.						.	.	.	.	.										.	.														.	.	.	.	.														.	.
Alig confidence																			.						.	.	.	.	.										.	.														.	.	.	.	.														.	.
Template Conservation
Template Sequence		G	S	N	V	Q	G	L	E	T	T	A	T	F	D	P	Q	T	D	E	F	V	I	H	S	P	T	L	T	S	S	K	W	W	P	G	G	L	G	K	V	S	T	H	A	V	V	Y	A	R	L	I	T	D	G	K	D	Y	G	V	N	G	F	I	V	Q	L	R	S	L	E	D	H	K	P	L	P	G	V	T	V
Template Known Secondary structure		S	S		G	G	G									T	T	T	T								S	G	G	G	S						T	T	T	T	T		S											T	T													B		T	T	T			B		T	T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270				.	.	.	.	.	.	.	.	.				280	.	.													.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.										.	.	.				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.										.	.	.				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	L	K	D	K	L	G	N	R	S	N	A	S	C	E	.	.	.	V	E	F	Q	D	A	I	G	W	.	.	.	L	L	G	.	.	.	.	.	.	.	.	.	.	.	.	L	E	G	E	G	I	R	L	I	L	K	M	G	G	M	T	R	F	D	C	A	L	G	S	H	A	M	M	R	R	A	F	S	L
Query Conservation																		.	.	.										.	.	.				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.										.	.	.				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	I	G	M	K	F	G	N	G	A	Y	N	S	M	D	N	G	V	L	S	F	D	H	V	R	I	P	R	D	Q	M	L	M	R	V	S	Q	V	T	K	E	G	K	Y	V	Q	S	D	I	P	R	Q	L	L	Y	G	T	M	V	Y	V	R	Q	S	I	V	A	D	A	S	L	A	M	S	R	A	V	C	I
Template Known Secondary structure								S	S	S	S	G	G	G	G	S								S	S					G	G	G	B			S	S					T	T	S						S	S		G	G	G	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.								330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.							.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.																																			.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.																																			.	.	.	.	.	.
Query Sequence		A	I	Y	H	A	H	Q	R	H	V	F	G	N	.	.	.	.	.	.	.	P	L	I	Q	Q	P	L	M	R	H	V	L	S	R	M	A	L	Q	L	E	G	Q	T	A	L	L	F	R	L	A	R	A	W	D	.	.	.	.	.	.	R	R	A	D	A	K	E	A	L	W	A	R	L	F	T	P	A	A	K	F
Query Conservation															.	.	.	.	.	.	.																																			.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																																			.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	R	Y	S	A	V	R	R	Q	F	G	S	Q	N	G	G	Q	E	T	Q	V	I	D	Y	K	T	Q	Q	N	R	L	F	P	L	L	A	S	A	Y	A	F	R	F	V	G	E	W	L	K	W	L	Y	T	D	V	T	Q	R	L	A	A	N	D	F	S	T	L	P	E	A	H	A	C	T	A	G	L	K	S
Template Known Secondary structure										B		S			S	T	T					B	G	G	G	S																																					T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	C	K	R	G	M	P	F	V	A	E	A	M	E	V	L	G	G	I	G	Y	C	E	E	S	E	L	P	R	L	Y	R	E	M	P	V	N	S	I	W	E	G	S	G	N	I	M	C	L	D	V	L	R	V	L	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	T	S	A	T	A	D	G	I	E	E	C	R	K	L	C	G	G	H	G	Y	L	C	S	S	G	L	P	E	L	F	A	V	Y	V	P	A	C	T	Y	E	G	D	N	V	V	L	Q	L	Q	V	A	R	F	L	M	K
Template Known Secondary structure																		T	G	G	G	G	G	S	G	G	G	S									G	G	G	G	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440