Job Description P33224 Confidence 100.00% Date Thu Jan 5 11:51:23 GMT 2012 Rank 26 Aligned Residues 365 % Identity 18% Template c2ebaI_ PDB info PDB header:oxidoreductase Chain: I: PDB Molecule:putative glutaryl-coa dehydrogenase; PDBTitle: crystal structure of the putative glutaryl-coa dehydrogenase from2 thermus thermophilus Resolution 2.21 Å

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		18	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		S	N	L	Y	L	S	D	G	A	L	.	.	.	C	E	A	V	T	R	E	G	A	G	W	D	S	D	F	L	A	S	I	G	Q	Q	L	G	T	A	E	S	L	E	L	G	R	L	A	N	V	N	P	P	E	L	L	R	Y	D	A	Q	G	R	R	L	D	D	V	R	F	H	P	A	W	H	L	L	M	Q	A
Query Conservation												.	.	.
Alig confidence												.	.	.																								.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	F	Y	A	L	E	D	L	L	T	P	E	E	K	E	V	Q	K	A	A	R	R	F	L	E	K	E	A	L	P	H	I	R	D	W	.	.	.	.	.	.	.	.	.	W	E	E	G	V	F	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	I	P	R
Template Known Secondary structure				T	T		G	G	G	G	S																			T								.	.	.	.	.	.	.	.	.			T	T				T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.										.	.	40	.	.	.	.	.																							.	.	.	.	50
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		L	C	T	N	R	V	H	N	L	A	W	E	E	D	A	R	S	G	A	F	V	A	R	A	A	R	F	M	L	H	.	.	.	.	A	Q	V	E	A	G	S	L	C	P	I	T	M	T	F	A	A	T	P	L	L	L	Q	M	L	P	A	P	F	Q	D	W	T	T	P	L	L	S	D	R	Y	D	S	H	L	L
Query Conservation																																.	.	.	.
Alig confidence																																.	.	.	.																																									.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		F	A	E	L	G	F	L	G	P	T	L	P	P	E	Y	G	G	A	G	V	S	S	A	A	Y	G	L	I	C	Y	E	L	E	R	V	D	S	G	L	R	S	F	V	S	V	Q	S	S	L	V	M	Y	P	I	Y	A	Y	G	S	E	E	Q	K	R	E	F	L	P	K	L	A	R	G	E	.	.	.	.	.	.
Template Known Secondary structure						T		S	S	T	T	S		G	G	G	T																																	T	T																						T	T	S	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		P	G	G	Q	K	R	G	L	L	I	G	M	G	M	T	E	K	Q	G	G	S	D	V	M	S	N	T	T	R	A	E	R	L	E	D	G	S	Y	R	L	V	G	H	K	W	F	F	S	V	P	.	Q	S	D	A	H	L	V	L	A	Q	T	A	G	G	L	S	C	F	F	V	P	R	F	L	P	D	G	Q	R
Query Conservation																																																				.
Alig confidence		.	.	.	.	.	.	.																						.								.														.													.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																						.								.																											.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	M	V	G	C	F	G	L	T	E	P	D	G	G	S	D	P	Y	G	N	M	K	.	T	R	A	R	R	D	T	.	W	V	L	N	G	T	K	M	W	I	T	N	G	N	L	A	H	L	A	V	I	W	A	K	D	E	.	.	.	.	.	.	.	V	L	G	F	L	V	P	T	D	T
Template Known Secondary structure		.	.	.	.	.	.	.	S									T	T		T	T	S	T	T	T	T			.								.												T	T	T	T		S										.	.	.	.	.	.	.								T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																						.								.																											.	.	.	.	.	.	.
Template SS confidence
									125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.								.	180	.	.	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		N	A	I	R	L	E	R	L	K	D	K	L	G	N	R	S	N	A	S	C	E	V	E	F	Q	D	A	I	G	W	.	.	L	L	G	L	E	G	E	G	I	R	L	I	L	K	M	G	G	M	T	R	F	D	C	A	L	G	S	H	A	M	M	R	R	A	F	S	L	A	I	Y	H	A	H	Q	R	H	V	F
Query Conservation																																.	.
Alig confidence																																.	.
Template Conservation
Template Sequence		P	G	F	Q	A	R	E	V	K	R	K	M	S	L	R	A	S	V	T	S	E	L	V	L	E	E	V	R	V	P	E	S	L	R	L	P	K	A	L	G	L	K	A	P	L	S	C	L	T	Q	A	R	F	G	I	A	W	G	A	M	G	A	L	E	A	V	Y	E	E	A	V	A	F	A	K	S	R	S	T	F
Template Known Secondary structure		T	T								S		S	S	S		S	S														G	G	G							S	T																																					B	S	S
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	P	L	I	Q	Q	P	L	M	R	H	V	L	S	R	M	A	L	Q	L	E	G	Q	T	A	L	L	F	R	L	A	R	A	W	D	R	R	A	D	A	K	E	A	L	W	A	R	L	F	T	P	A	A	K	F	V	I	C	K	R	G	M	P	F	V	A	E	A	M	E	V	L	G	G	I	G	Y	C	E
Query Conservation
Alig confidence																																												.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.
Template Sequence		G	E	P	L	A	K	K	Q	L	V	Q	A	K	L	A	E	M	L	A	W	H	T	E	G	L	L	L	A	W	R	L	A	R	L	K	D	E	G	K	L	T	P	.	.	.	.	.	.	A	Q	V	S	L	A	K	R	Q	N	V	W	K	A	L	Q	A	A	R	M	A	R	D	I	L	G	G	S	G	I	T	L
Template Known Secondary structure		S	S	B	G	G	G	S																														T	T					.	.	.	.	.	.																										G	G	G	G	G	S	T
Template Predicted Secondary structure																																												.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.							.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	E	L	P	R	L	Y	R	E	M	P	V	N	S	I	W	E	G	S	G	N	I	M	C	L	D	V	L	R	V	L	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Y	H	A	I	R	H	M	L	N	L	E	T	V	Y	T	Y	E	G	T	H	D	V	H	T	L	V	L	G	R	E	I	T	G
Template Known Secondary structure		T	S	S												T	T	S	S	S															S
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.