Job Description P33224 Confidence 100.00% Date Thu Jan 5 11:51:23 GMT 2012 Rank 6 Aligned Residues 385 % Identity 18% Template c2ddhA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa oxidase; PDBTitle: crystal structure of acyl-coa oxidase complexed with 3-oh-dodecanoate Resolution 2.07 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		D	G	A	L	C	E	A	V	T	R	E	G	A	G	W	D	S	D	F	L	A	S	I	G	Q	Q	L	G	T	A	E	S	L	E	L	G	R	L	A	N	V	.	.	.	N	P	P	E	L	L	R	Y	D	A	Q	G	R	R	L	D	D	V	R	F	H	P	A	W	H	L	L	M	Q	A	L	C	T	N	R	V
Query Conservation																																											.	.	.
Alig confidence								.	.																		.	.															.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation								.	.																		.	.																																	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	D	L	R	K	.	.	E	R	A	S	A	T	F	N	P	E	L	I	T	H	I	L	D	.	.	G	S	P	E	N	T	R	R	R	R	E	I	E	N	L	I	L	N	D	P	D	F	Q	H	E	D	Y	N	F	L	T	R	.	.	.	.	.	.	.	.	.	S	Q	R	Y	E	V	A	V	K	K	S	A
Template Known Secondary structure								.	.						S	S											.	.	T	S																T		G	G	G			S		G	G	G	S			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.																		.	.																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.										.	.	.	60	.	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		H	N	L	A	W	E	E	D	A	R	S	G	A	F	V	A	R	A	A	R	F	M	L	H	A	Q	V	E	A	G	S	L	C	P	I	T	M	T	F	A	.	A	T	P	L	L	L	Q	M	L	P	A	P	F	Q	D	W	T	T	P	L	L	S	D	R	Y	D	S	H	L	L	P	G	G	Q	K	R	G	L	L
Query Conservation																																										.
Alig confidence																		.	.	.																						.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	M	V	K	K	M	R	E	Y	G	I	S	D	P	E	E	.	.	.	I	M	W	F	K	N	S	V	H	R	G	H	P	E	P	L	D	L	H	L	G	M	F	L	P	T	L	L	Q	A	T	A	E	Q	Q	E	R	F	F	M	P	A	W	N	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T
Template Known Secondary structure										T	T							.	.	.										T	T				T	T						T																						T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																		.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130														.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.						.	.	.	.	.	.	.	.		220		.	.	.	.	.	.	.	.	.	230	.	.	.						.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																													.						.	.	.	.	.									.		.														.	.	.	.	.
Query SS confidence																													.						.	.	.	.	.									.		.														.	.	.	.	.
Query Sequence		I	G	M	G	M	T	E	K	Q	G	G	S	D	V	M	S	N	T	T	R	A	E	R	L	E	D	G	.	S	Y	R	L	V	.	.	.	.	.	G	H	K	W	F	F	S	V	.	P	.	Q	S	D	A	H	L	V	L	A	Q	T	A	G	.	.	.	.	.	G	L	S	C	F	F	V	P	R	F	L	P	D
Query Conservation																													.						.	.	.	.	.									.		.														.	.	.	.	.
Alig confidence																													.						.	.	.	.	.									.		.														.	.	.	.	.
Template Conservation
Template Sequence		G	T	Y	A	Q	T	E	M	G	H	G	T	H	L	R	G	L	E	T	T	A	T	Y	D	P	K	T	Q	E	F	I	L	N	S	P	T	V	T	S	I	K	W	W	P	G	G	L	G	K	T	S	N	H	A	I	V	L	A	Q	L	I	T	Q	G	E	C	Y	G	L	H	A	F	V	V	P	I	R	E	I	G
Template Known Secondary structure								B	T	T	B	S	S		G	G	G									T	T	T	T								S	S	T	T	S					T	T	T	T	T	T		S											T	T													B		T	T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
				247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.				.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																		.	.	.			.	.	.
Query SS confidence		.	.																																		.	.	.			.	.	.
Query Sequence		.	.	G	Q	R	N	A	I	R	L	E	R	L	K	D	K	L	G	N	R	S	N	A	S	C	E	V	E	F	Q	D	A	I	G	W	.	.	.	L	L	.	.	.	G	L	E	G	E	G	I	R	L	I	L	K	M	G	G	M	T	R	F	D	C	A	L	G	S	H	A	M	M	R	R	A	F	S	L	A	I
Query Conservation		.	.																																		.	.	.			.	.	.
Alig confidence		.	.																																		.	.	.			.	.	.
Template Conservation
Template Sequence		T	H	K	P	L	P	G	I	T	V	G	D	I	G	P	K	F	G	Y	E	E	M	D	N	G	Y	L	K	M	D	N	Y	R	I	P	R	E	N	M	L	M	K	Y	A	Q	V	K	P	D	G	T	Y	V	K	P	L	M	V	F	V	R	S	F	L	V	G	N	A	A	Q	S	L	S	K	A	C	T	I	A	I
Template Known Secondary structure		T			B		T	T										S	S		T	T									S	S					G	G	G	B			S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		319	320	.	.	.	.	.	.	.	.	.								330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure													.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.
Query Sequence		Y	H	A	H	Q	R	H	V	F	G	N	.	.	.	.	.	.	.	P	L	I	Q	Q	P	L	M	R	H	V	L	S	R	M	A	L	Q	L	E	G	Q	T	A	L	L	F	R	L	A	R	A	W	D	R	R	A	D	A	K	E	A	L	W	A	R	L	F	T	P	A	A	K	F	V	I	C	K	R	G	M	P
Query Conservation													.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.																																									.	.	.	.
Template Conservation																																																												.	.	.	.
Template Sequence		R	Y	S	A	V	R	R	Q	S	E	I	K	Q	S	E	P	E	P	Q	I	L	D	F	Q	T	Q	Q	Y	K	L	F	P	L	L	A	T	A	Y	A	F	H	F	V	G	R	Y	M	K	E	T	Y	L	R	S	E	L	P	E	.	.	.	.	L	H	A	L	T	A	G	L	K	A	F	T	T	W	T	A	N	A
Template Known Secondary structure								B		S		S	S	T	T	S				B	G	G	G	S																																				.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.					360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	A	E	A	M	E	V	L	G	G	I	G	Y	C	E	E	S	E	L	P	R	L	Y	R	E	M	P	V	N	S	I	W	E	G	S	G	N	I	M	C	L	D	V	L	R	V	L	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	E	E	C	R	M	A	C	G	G	H	G	Y	S	H	S	S	G	I	P	N	I	Y	V	T	F	T	P	A	C	T	F	E	G	E	N	T	V	M	M	L	Q	T	A	R	F	L	M	K
Template Known Secondary structure										T	T					S	G	G	G	S									G	G	G	G	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.