Job Description P33224 Confidence 100.00% Date Thu Jan 5 11:51:23 GMT 2012 Rank 21 Aligned Residues 370 % Identity 23% Template c1bucB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:butyryl-coa dehydrogenase; PDBTitle: three-dimensional structure of butyryl-coa dehydrogenase from2 megasphaera elsdenii Resolution 2.50 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	S	D	G	A	L	C	E	A	V	T	R	E	G	A	G	W	D	S	D	F	L	A	S	I	G	Q	Q	L	G	T	A	E	S	L	E	L	G	R	L	A	N	V	N	P	P	E	L	L	R	Y	D	A	Q	G	R	R	L	D	D	V	R	F	H	P	A	W	H	L	L	M	Q	A	L	C	T	N	R	V
Query Conservation
Alig confidence															.															.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.															.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	N	L	T	D	I	Q	Q	D	F	L	K	L	.	A	H	D	F	G	E	K	K	L	A	P	T	V	T	.	.	.	.	.	E	R	D	H	K	G	I	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	L	I	D	E	L	L	S	L	G	I
Template Known Secondary structure															.								T							.	.	.	.	.						T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	S	G
Template Predicted Secondary structure															.															.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.																											.	40	.	.	.	.	.	.	.	.	.	50
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.
Query Sequence		H	N	L	A	W	E	E	D	A	R	S	G	A	F	V	A	R	A	A	R	F	M	L	H	A	Q	V	E	A	G	S	L	C	P	.	.	.	.	.	.	.	I	T	M	T	F	A	A	T	P	L	L	L	Q	M	L	P	A	P	F	Q	D	W	T	T	P	L	L	S	D	R	Y	D	S	H	L	L	P	G	G
Query Conservation																																				.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		T	G	A	Y	F	E	E	K	Y	G	G	S	G	D	D	G	G	D	V	L	S	Y	I	L	A	V	E	E	L	A	K	Y	D	A	G	V	A	I	T	L	S	A	T	V	S	L	C	A	N	P	I	W	Q	F	G	T	E	A	Q	K	E	K	F	L	V	P	L	V	E	G	T	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	T	T	S		G	G	G	T		S	G	G	G	T																															T																							T	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		Q	K	R	G	L	L	I	G	M	G	M	T	E	K	Q	G	G	S	D	V	M	S	N	T	T	R	A	E	R	L	E	D	G	S	Y	R	L	V	G	H	K	W	F	F	S	V	P	.	Q	S	D	A	H	L	V	L	A	Q	T	A	G	G	L	S	C	F	F	V	P	R	F	L	P	D	G	Q	R	N	A	I
Query Conservation																																																	.
Alig confidence		.	.	.	.																																												.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	K	L	G	A	F	G	L	T	E	P	N	A	G	T	D	A	S	G	Q	Q	T	I	A	T	K	N	D	D	G	T	Y	T	L	N	G	S	K	I	F	I	T	N	G	G	A	A	D	I	Y	I	V	F	A	M	T	D	K	S	K	G	N	H	G	I	T	A	F	I	L	E	D	G	T	P	G	F
Template Known Secondary structure		.	.	.	.	S								B	T	T	B	S	S	S	T	T										T	T	S													T	T	T	T		S								S		S	S	S	S	T	T									T	T		T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		R	L	E	R	L	K	D	K	L	G	N	R	S	N	A	S	C	E	V	E	F	Q	D	A	I	G	W	.	.	.	L	L	G	L	E	G	E	G	I	R	L	I	L	K	M	G	G	M	T	R	F	D	C	A	L	G	S	H	A	M	M	R	R	A	F	S	L	A	I	Y	H	A	H	Q	R	H	V	F	G	N
Query Conservation																													.	.	.
Alig confidence																													.	.	.
Template Conservation
Template Sequence		T	Y	G	K	K	E	D	K	M	G	I	H	T	S	Q	T	M	E	L	V	F	Q	D	V	K	V	P	A	E	N	M	L	G	E	E	G	K	G	F	K	I	A	M	M	T	L	D	G	G	R	I	G	V	A	A	Q	A	L	G	I	A	E	A	A	L	A	D	A	V	E	Y	S	K	Q	R	V	Q	F	G	K
Template Known Secondary structure										S	S		T	T	S														G	G	G			S		T	T																																										T	T
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	I	Q	Q	P	L	M	R	H	V	L	S	R	M	A	L	Q	L	E	G	Q	T	A	L	L	F	R	L	A	R	A	W	D	R	R	A	D	A	K	E	A	L	W	A	R	L	F	T	P	A	A	K	F	V	I	C	K	R	G	M	P	F	V	A	E	A	M	E	V	L	G	G	I	G	Y	C	E	E	S
Query Conservation
Alig confidence																																										.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.
Template Sequence		P	L	C	K	F	Q	S	I	S	F	K	L	A	D	M	K	M	Q	I	E	A	A	R	N	L	V	Y	K	A	A	C	K	K	Q	E	G	K	P	F	T	.	.	.	.	.	.	V	D	A	A	I	A	K	R	V	A	S	D	V	A	M	R	V	T	T	E	A	V	Q	I	F	G	G	Y	G	Y	S	E	E	Y
Template Known Secondary structure			G	G	G	S																															T					.	.	.	.	.	.																									T	G	G	G	G	G	S	T	T	S
Template Predicted Secondary structure																																										.	.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.							.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	P	R	L	Y	R	E	M	P	V	N	S	I	W	E	G	S	G	N	I	M	C	L	D	V	L	R	V	L	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	A	R	H	M	R	D	A	K	I	T	Q	I	Y	E	G	T	N	E	V	Q	L	M	V	T	G	G	A	L	L	R
Template Known Secondary structure											G	G	G	G	T	S	S	S														T
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.