Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABB8
Confidence99.33%DateThu Jan 5 11:15:07 GMT 2012
Rank36Aligned Residues142
% Identity19%Templated1rkqa_
SCOP infoHAD-like HAD-like Predicted hydrolases Cof
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   546...550.........560.........570.........580.........
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Query Sequence  PPKETTAPALKALKASGITVKILTGDSELVAAKVCHEVGLDAGE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKL
Template Known Secondary structure 


TT

SS
GGGTTT

STT
GGGTTTT



B
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   21........30.........40.........50.........60.........70.........80.........90.........100
 
   590.........600.........610..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VVIGSDIETLSDDELANLAQRTT
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Template Sequence  SREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYT
Template Known Secondary structure  T

SS


SS

TT



GGGS
TT

B


S
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   101........110.........120.........130.........140.........150.........160.........170.........180
 
   613.. ....620.........630.........640.........650.........660.........670.........680
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Query Sequence  LFA. . . . . . . . . . . . RLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMV
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Template Conservation                   
                 
  


  

  

  
   


 

    
  

 
       
Template Sequence  VLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDG
Template Known Secondary structure  TTTT
ST

GGG
SGGGSS
TTS

S


TTTT
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   181........190.........200.........210.........220.........230.........240.........250.........260
 
   681......
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Query Sequence  LEEGVIE
Query Conservation 
   
  
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Template Conservation 
   
  
Template Sequence  VAFAIEK
Template Known Secondary structure 
Template Predicted Secondary structure 
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   261......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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