Job Description P0ABB8 Confidence 40.16% Date Thu Jan 5 11:15:07 GMT 2012 Rank 237 Aligned Residues 106 % Identity 19% Template d1ny1a_ SCOP info 7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase NodB-like polysaccharide deacetylase Resolution 1.80

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		540	.	.	.	.	.	.	.	.	.	550		.	.	.	.	.	.	.	.	.	560	.	.	.	.		.	.	.	.	.	570	.					.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure													.															.								.	.	.	.																																								.	.	.
Query SS confidence													.															.								.	.	.	.																																								.	.	.
Query Sequence		Y	I	A	F	L	D	P	P	K	E	T	.	T	A	P	A	L	K	A	L	K	A	S	G	I	T	.	V	K	I	L	T	G	D	.	.	.	.	S	E	L	V	A	A	K	V	C	H	E	V	G	L	D	A	G	E	V	V	I	G	S	D	I	E	T	L	S	D	D	E	L	A	N	L	A	Q	R	.	.	.
Query Conservation													.															.								.	.	.	.																																								.	.	.
Alig confidence													.															.								.	.	.	.																																								.	.	.
Template Conservation
Template Sequence		Y	L	T	F	D	N	G	Y	E	N	G	Y	T	P	K	V	L	D	V	L	K	K	H	R	V	T	G	T	F	F	V	T	G	H	F	V	K	D	Q	P	Q	L	I	K	R	X	S	D	E	G	H	I	I	G	N	H	S	F	H	H	P	D	L	T	T	K	T	A	D	Q	I	Q	D	E	L	D	S	V	N	E
Template Known Secondary structure								S	S			S												T	T																									T	T								S	S				G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
												611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	T	T	L	F	A	R	L	T	P	M	H	K	E	R	I	V	T	L	L	K	R	E	G	H	V	V	G	F	M	G	D	G	I	N	D
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	V	Y	K	I	T	G	K	Q	D	N	L	Y	L	R	P	P	R	G	V	F	S	E	Y	V	L	K	E	T	K	R	L	G	Y	Q	T	V	F	W	S	V	A	F	V	D
Template Known Secondary structure								S										G	G	G													T	T				B			S	B			S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions