Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABB8
Confidence98.91%DateThu Jan 5 11:15:07 GMT 2012
Rank53Aligned Residues141
% Identity22%Templated1nf2a_
SCOP infoHAD-like HAD-like Predicted hydrolases Cof
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   546...550.........560.........570.........580.........
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Query Sequence  PPKETTAPALKALKASGITVKILTGDSELVAAKVCHEVGLDAGE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EISEKDRRNIEKLSR. KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKP
Template Known Secondary structure 


TT.TS
SS
SSS


GGGTTTT

B
GG
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   1920.........30... ......40.........50.........60.........70.........80.........90.......
 
   590.........600.........610.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VVIGSDIETLSDDELANLAQRTTLFA.
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Template Sequence  LNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKS
Template Known Secondary structure  G



SS
SS

TT


TT
BS

TTTS
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   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   616...620 .........630.. .......640.........650.........660.........670.........680....
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Query Sequence  . . . . . RLTPM. . HKERIVTLLKRE. . . . GHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEG
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Template Sequence  FPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYV
Template Known Secondary structure  TT
TT

T

GGG
STT
S
TTS

S


TTTT
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   178.180.........190.........200.........210.........220.........230.........240.........250.......
 
   685..
Predicted Secondary structure 
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Query Sequence  VIE
Query Conservation 
  
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Template Conservation 
  
Template Sequence  LER
Template Known Secondary structure  TT
Template Predicted Secondary structure 
Template SS confidence 


   258.260
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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